Pairwise Alignments

Query, 439 a.a., branched-chain amino acid transport system II carrier protein from Serratia liquefaciens MT49

Subject, 467 a.a., branched-chain amino acid transport system II carrier protein (RefSeq) from Shewanella sp. ANA-3

 Score =  319 bits (817), Expect = 1e-91
 Identities = 180/455 (39%), Positives = 268/455 (58%), Gaps = 35/455 (7%)

Query: 3   HRLTSKDIIALGFMTFALFVGAGNIIFPPMVGLQSGEHVWTAAIGFLITAVGLPVMTVIA 62
           ++++  D + LGFMTFA F+GAGN+IFPP  G+ +GE++  A +GFLITAVGLP++ +IA
Sbjct: 4   NQMSIGDTLGLGFMTFAFFLGAGNLIFPPFAGMLAGENMPLAMLGFLITAVGLPLVGLIA 63

Query: 63  LARVGGGIDALSSPIGRRAGLLLATVCYLAVGPLFATPRTATVSFEVGIAPLTGD----- 117
           +A+  G + A+       A   LA   Y+ +GP FA PRT  V++E+G  P   +     
Sbjct: 64  VAKAQGKVMAMLPVFAATA---LAIAIYIIIGPAFAAPRTGLVAYEIGAKPFIDNTTATI 120

Query: 118 --GAMPL----FIYSLVYFALVIGISLYPGRLLDTVGHVLAPLKIVALGALGIAALVWPA 171
             G++ L     IY+L +F + + ++L+PG+LLD+VG VL P+ ++ L  L ++ +  PA
Sbjct: 121 MLGSLSLNLSQLIYTLCFFTVTMLLALFPGKLLDSVGKVLTPILLLLLVGLALSVVFLPA 180

Query: 172 GTPIPATDIYQNVPFSSGFVNGYLTMDTLGALVFGIVIVNAARSRGVKDAGLLTRYTILA 231
           G    A   YQN P + G + GY TMDTL +L+FG++I++  R +G+      T+Y I A
Sbjct: 181 GDVGAAVGDYQNHPLTKGILEGYNTMDTLASLMFGMLIIDLLRKKGIDQPSAQTKYLIRA 240

Query: 232 GLIAGVGLTLVYLSLFKLGSGSGVLVPDATNGAVILHAYVQNTFGGLGSFFLAALIFIAC 291
             IA  GL  VY+SLF LG+ +G +   A NG  IL  YV   FG LG+  L+ ++ +AC
Sbjct: 241 AFIAAAGLAFVYVSLFFLGATAGDIAVGAKNGGEILTNYVTREFGSLGTVLLSTVVTLAC 300

Query: 292 MVTAVGLTCACAEFFAQYLP-FSYKTLVFILGLFSMVVSNLGLSHLIQISIPVLTAIYPP 350
           + TAVGL  AC+EFF + +P  SY+ LV +L     +++N+GLS LI ISIPVL A+YP 
Sbjct: 301 LTTAVGLVSACSEFFNELMPKLSYRFLVVLLSAICALIANVGLSQLITISIPVLMAVYPV 360

Query: 351 CIVLVVLSFTLRWWNSAPRIIAPVMLVSLLFGILDAVKASAFQQVLPD------------ 398
            I LV ++F   ++          + V+LLFGI D +K +A      D            
Sbjct: 361 AIALVAVTFLTEYFPRPQFAHRAALSVALLFGIFDGMKVAAKSLTGEDGKGVTEAAQSFI 420

Query: 399 --------WTNHLPLAEQGLAWLSPSLLMLVLVAI 425
                     + LPL E+G+AWL P+L+++VL  I
Sbjct: 421 DLVSGMSPTLSILPLYEEGMAWLLPTLVVIVLCLI 455