Pairwise Alignments

Query, 389 a.a., beta-ketoacyl-[acyl-carrier-protein] synthase family protein from Serratia liquefaciens MT49

Subject, 420 a.a., 3-oxoacyl-[acyl-carrier-protein] synthase II (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  148 bits (374), Expect = 2e-40
 Identities = 121/425 (28%), Positives = 190/425 (44%), Gaps = 58/425 (13%)

Query: 2   IYFSAVGMVNALGNDLPQIAQNLARGISPGMQQQTQWLTGGAPSWFGNVQGDLPVIPESL 61
           +  + +G +  +GND+P+  +NL  G+S         +T    S F   Q    V    +
Sbjct: 6   VVVTGLGAITPVGNDVPEFWENLVNGVSGAGP-----ITHFDASQF-KTQFACEVKNFDV 59

Query: 62  KRHNSRNNRLLLAAFAQIETPV-REAIARYGAD-------RVAVIMGTSTSGIHEGELAL 113
            ++  R     +  + Q    V +EA++  G D       R+ VI G    GIH  E  +
Sbjct: 60  TKYIDRKEARKMDLYTQYAVAVAKEAVSDSGLDVEKEDLNRIGVIFGAGIGGIHTFEEEV 119

Query: 114 HQYQAGQWPPGYHYHQQELGD-------PSQF-------LSAFLSTRGPAYTLSTACSSS 159
                     G +Y  QE+G        P          +S      GP Y   +AC++S
Sbjct: 120 ----------GNYYTHQEIGPKFNPFFIPKMISDIAAGQISIMYGFHGPNYATCSACATS 169

Query: 160 ARAIISGKRLIAAGLVDAAIVGGADS-LCQMPINGFHCLESLS------AERCTPFATGR 212
             AI     LI  G  +  + GG+++ +    + GF+ + +LS      ++   PF+  R
Sbjct: 170 TNAIADAFNLIRLGKANVIVSGGSEAAIFPAGVGGFNAMHALSTRNDEPSKASRPFSASR 229

Query: 213 SGINIGEAAALMLLTREPAPVA--------LLGVGESSDAWHMSAPHPAGEGAERAMTMA 264
            G  +GE    ++L       A        + GVG S+DA H++A HP G GA+  M  A
Sbjct: 230 DGFIMGEGGGCLILEELEHAKARGAKIYAEVAGVGMSADAHHLTASHPEGLGAKLVMLNA 289

Query: 265 LQQAGLSTDQVGYINLHGTATRLNDQVEALVVNRLFGE---QTPCSSTKHLTGHTLGAAG 321
           L+ A +   +V YIN+HGT+T + D  EA  +  +FG+   +   SSTK +TGH LGAAG
Sbjct: 290 LEDAEMDPKEVDYINVHGTSTPVGDISEAKAIKEVFGDHAYELNISSTKSMTGHLLGAAG 349

Query: 322 AVEAALSWLLLTQSLPLPQQDFSAVPRDAEL-APIGLVC-EPQTLGARAILSNSFAFGGN 379
           AVE+  S L +   +  P  +      D  +   +     + Q       LSN+F FGG+
Sbjct: 350 AVESIASILAIKNGIVPPTINHEEGDNDENIDYDLNFTFNKAQKREVNVALSNTFGFGGH 409

Query: 380 NACLL 384
           NAC++
Sbjct: 410 NACVI 414