Pairwise Alignments

Query, 256 a.a., basic amino acid ABC transporter substrate-binding protein from Serratia liquefaciens MT49

Subject, 251 a.a., ABC-type amino acid transport/signal transduction systems, periplasmic component/domain from Pseudomonas stutzeri RCH2

 Score =  114 bits (286), Expect = 1e-30
 Identities = 70/246 (28%), Positives = 123/246 (50%), Gaps = 3/246 (1%)

Query: 6   VVIGACLAATLSASVLAAEPTYVVGSGGTYRPFEFENSSKQLEGFDIDIIKAVAKAENFQ 65
           +++ A  +  +     AAE   + G+ G Y PF   ++S ++ GFD+DI  A+      +
Sbjct: 7   ILLTAAASLIIGTQAFAAEKLRI-GTEGAYPPFNLIDASGKVVGFDLDISHALCAKMKVE 65

Query: 66  VKLVNTPWEGIFATLNSGDRDIIISGITITDKRKQMVDFSAPYFPAEQAIVVPKDSGVDS 125
            ++V + W+GI   LN+G  D + + +++T++RK  VDF+  Y+  +   V PK+    +
Sbjct: 66  CEVVTSDWDGIIPALNAGKFDFLAASMSVTEERKNAVDFTDHYYTNKLQFVAPKNVEFQT 125

Query: 126 IAA-LKALKVGVVNSSTGDIVVSDVLGKNNTAIKRFDNTPLMLQELYEDGIGAAVGDVGV 184
               LK   +G   ++     + D L +    IK +D       +L    +   + D  V
Sbjct: 126 DEGYLKGKVIGAQRATIAGTWLEDNLDR-VVDIKLYDTQENAYLDLASGRVDGILADTFV 184

Query: 185 AKFYIKTHPEKEFKLVSDAKFERQYFGIAVAKGNDELRGKINAGLKKIIADGTYAKIYQT 244
              ++K+   K F+   +  F+     IAV KGNDELR ++N  L +IIADGTY +I   
Sbjct: 185 QWEWLKSDAGKNFEFKGEPVFDDDKIAIAVRKGNDELRERLNKALAEIIADGTYKQINDK 244

Query: 245 WFDSNV 250
           +F  ++
Sbjct: 245 YFPFSI 250