Pairwise Alignments

Query, 479 a.a., H(+)/Cl(-) exchange transporter ClcA from Serratia liquefaciens MT49

Subject, 596 a.a., chloride channel protein from Pedobacter sp. GW460-11-11-14-LB5

 Score =  125 bits (313), Expect = 5e-33
 Identities = 113/437 (25%), Positives = 200/437 (45%), Gaps = 39/437 (8%)

Query: 35  ILFMAALVGTMAGLLGVAFDKAVDWVQQQRFSALAQVADYWI-LVWPLAFILSAALAMLG 93
           ++ +A +VG +AGL   A       +++   S       Y++  ++P+  I    L +  
Sbjct: 26  LIILAVIVGILAGLAAAALKSLTHHIEEFLQSDWHWKYKYYLYFIFPMIGIFLTVLYIK- 84

Query: 94  YYLVRRFAPEAGGSGIPEIEGALEELRPVRWWRVIPVKFIGGMGTLGAGMVLGREGPTVQ 153
            Y +R+   E G +  P +    ++   V    +   + I    T+G G   G E P V 
Sbjct: 85  -YFIRKTKFETGLT--PLLYAISKKSSKVEAHNIYS-QIITAAVTVGFGGSTGLEAPIVT 140

Query: 154 MGGNVGRMVLDIFRMRGAEARH--SLLATGAAAGLSAAFNAPLAGILFIIEEMRPQFRYN 211
            G  +G    ++ R+ G   R    L+A GAAAG++ AFN+P+AGI+F IE + P+F   
Sbjct: 141 SGSAIGS---NLGRLLGLSYREITMLVACGAAAGIAGAFNSPVAGIVFAIEILLPEF--T 195

Query: 212 LISIKAVFIGVIMSSVVFQLFNGEGSVIAVGKLSSAPINTLWLYLVLGAIFGAVGVMFNA 271
           + +   + +    ++VV +LF  +     V +     +N L+ Y++L    G   + F  
Sbjct: 196 IPAFIPLLLSAATAAVVARLFYTQQLFFLVTE--GWKVNALFYYVILACFIGLFSIYFTK 253

Query: 272 LVFRTQDMFARLHGGKMRKILLMGGLLGGICGILGLIQPEAAGGGFGLIPIAAAGNYSVG 331
             +  + +F ++     +  +++GGL+    G+L  + P   G G+  I     G+Y   
Sbjct: 254 ANYAVKGLFYKIKHPYTK--VIVGGLM---LGVLVFLFPTLYGEGYITIKGLLKGDYQAV 308

Query: 332 M---------------LMFIFIT---RVITTLLCFGSGAPGGIFAPMLALGTLFGTAFGL 373
           +               ++F  +T   + I TL+  G+G  GG FAP L +G L G  F  
Sbjct: 309 INNSIFADYNTIPALVVLFTVVTIFMKSIATLVTLGAGGNGGTFAPSLIMGGLIGFIFAY 368

Query: 374 AGGHLFPEYGIEAGTFAIAGMGALFAATVRAPLTGIVLVLEMTDNYQLILPMIITCLGAT 433
              +L     +    F +AGM A   + + APLTGI L+ E+T  Y L++P++IT   + 
Sbjct: 369 VV-NLSGLAQLNVSNFIVAGMAAALGSIMHAPLTGIFLIAEITGGYILMVPLMITTAISY 427

Query: 434 LVAQFLGGKPLYSSILA 450
            + +      +Y+  LA
Sbjct: 428 AINRSSQKHSIYTKALA 444