Pairwise Alignments

Query, 479 a.a., H(+)/Cl(-) exchange transporter ClcA from Serratia liquefaciens MT49

Subject, 578 a.a., voltage-gated chloride channel protein ClcB from Herbaspirillum seropedicae SmR1

 Score =  147 bits (370), Expect = 1e-39
 Identities = 117/428 (27%), Positives = 203/428 (47%), Gaps = 15/428 (3%)

Query: 34  AILFMAALVGTMAGLLGVAFDKAVDWVQQQRFSALAQVADYWI-LVWPLAFILSAALAML 92
           ++L   AL G +  L  +AF + +  +Q           D    L W    +L     ++
Sbjct: 23  SMLLWGALAGFVGALATIAFRECIALLQIWMTGHDGSFVDIAKGLPWYTRVLLPTCGGVV 82

Query: 93  -GYYLV-RRFAPEAGGSGIPEIEGALEELRPVRWWRVIPVKFIGGMGTLGAGMVLGREGP 150
            G +LV  +  P   G    E     +   PVR      ++ I  + ++ +G  +GREGP
Sbjct: 83  AGLFLVWAKRTPAGNGGDYMEAVAIGDGAIPVR---NTLLRSISSLASIASGGSIGREGP 139

Query: 151 TVQMGGNVGRMVLDIFRMRGAEARHSLLATGAAAGLSAAFNAPLAGILFIIEEMRPQFRY 210
            VQ+      +V        +  R  L+A GAAAG+++A+NAP+AG  FI E +      
Sbjct: 140 MVQLSALCASLVGKFSHFPSSRLR-LLVACGAAAGITSAYNAPIAGAFFITEIVLGSLVM 198

Query: 211 NLISIKAVFIGVIMSSVVFQLFNGEGSVIAVGKLSSAPINTLWLYLVLGAIFGAVGVMFN 270
              S   V +  +++++  +   G  +   +          + L+LVLG + G +   F 
Sbjct: 199 E--SFGPVVVASVVANITMRELPGYRAAYEMPYFPEIGGWEVMLFLVLGVLAGVLAPQFL 256

Query: 271 ALVFRTQDMFARLHGGKMRKILLMGGLLGGIC-GILGLIQPEAAGGGFGLIPIAAAGNYS 329
            ++   +  F     GK+R  L +   +GG+  G++ +  PE  G G+ L+      ++ 
Sbjct: 257 RVLELGKHGF-----GKLRLPLPVRLGVGGLLVGLISVQVPEVWGNGYSLVNSLLHTSWV 311

Query: 330 VGMLMFIFITRVITTLLCFGSGAPGGIFAPMLALGTLFGTAFGLAGGHLFPEYGIEAGTF 389
              ++ + + +V+ T +  GSGA GGIF P L +G   G  FG A   L P +  +   +
Sbjct: 312 WQAVLMVLVVKVLATSITVGSGAVGGIFTPTLFVGAAVGYLFGDAAQALLPVHISQPFAY 371

Query: 390 AIAGMGALFAATVRAPLTGIVLVLEMTDNYQLILPMIITCLGATLVAQFLGGKPLYSSIL 449
           A+ GMGA  AA   APL  I+++ EMT +YQ++LP++++C+ A +VA+ + G+ +Y   L
Sbjct: 372 AMVGMGAFLAAASYAPLMAILMIFEMTLSYQVVLPLMLSCVVAYVVARSVDGRSMYEITL 431

Query: 450 ARTLQRQE 457
            R    +E
Sbjct: 432 KRHRDNEE 439