Pairwise Alignments

Query, 479 a.a., H(+)/Cl(-) exchange transporter ClcA from Serratia liquefaciens MT49

Subject, 436 a.a., chloride channel protein from Ralstonia sp. UNC404CL21Col

 Score =  138 bits (347), Expect = 4e-37
 Identities = 121/409 (29%), Positives = 193/409 (47%), Gaps = 31/409 (7%)

Query: 41  LVGTMAGLLGVAFDKAVDWVQQQRFSALAQVADYWILVWPLAFILSAALAMLGYYLVRRF 100
           L   + GL+ VA+ KA+D +  + F  +   A +W     L  +++   A L  +L RRF
Sbjct: 27  LGAVLVGLVSVAYAKAID-LGFELFRGIVSHA-FW-----LPIVITPLGAALAIWLTRRF 79

Query: 101 APEAGGSGIPEIEGALEELR---PVRWWRVIPVKFIGGMGTLGAGMVLGREGPTVQMGGN 157
              A GSGIP++  ALE+ R    +   R++  K +     +  G  +GREGPTVQ+G +
Sbjct: 80  FRGAEGSGIPQVIAALEDGRLSSSLLSLRIMFGKIVVSFLGILCGFTIGREGPTVQIGAS 139

Query: 158 VGRMVLDIFRMRGAEARHSLLATGAAAGLSAAFNAPLAGILFIIEEMRPQFRYNLISIKA 217
           +   +   +R         L   GAAAGL+AAFN PLAG++F IEE+   F     +   
Sbjct: 140 LMYAMRRGYRRSSQHIERQLALAGAAAGLAAAFNTPLAGVVFAIEELTRSFVAR--NSGT 197

Query: 218 VFIGVIMSSVVFQLFNGE----GSVIAVGKLSSAPINTLWLYLVLGAIFGAVGVMFNALV 273
           +   +I S VV     G     G + A+G+   A +  +   +   A+ G VG +F  L+
Sbjct: 198 LITAIIFSGVVALGLQGNYLYFGRIQAIGQFHLALVPVV---IGASALCGVVGGVFCWLL 254

Query: 274 FR-TQDMFARLHGGKMRKILLMGGLLGGICGILGLIQPEAAGGGFGLIPIAAAGNYSVGM 332
               + M ARL   +  + +    L G    ++GL+   + G  FG     A G      
Sbjct: 255 LNIPRWMPARLVDIRQTQPVWFAFLCGVAIALIGLV---SGGTTFGSGYAEARGLLETHQ 311

Query: 333 LM--FIFITRVITTLLCFGSGAPGGIFAPMLALGTLFGTAFGLAGGHLFPEYGIEAGTFA 390
            +  F  + +    +  + SG PGGIFAP LA+G   G    L          I   + A
Sbjct: 312 ALSPFYAVLKFGALIASYLSGIPGGIFAPSLAIGAGLGNVMSLVTS------AIPLPSLA 365

Query: 391 IAGMGALFAATVRAPLTGIVLVLEMTDNYQLILPMIITCLGATLVAQFL 439
              M    AA  ++P+T  V+V+EM D ++++LP++   L ++ V++ L
Sbjct: 366 ALCMVGYLAAVTQSPITSFVIVMEMIDGHEMVLPLMAVALLSSQVSKAL 414