Pairwise Alignments

Query, 479 a.a., H(+)/Cl(-) exchange transporter ClcA from Serratia liquefaciens MT49

Subject, 441 a.a., chloride channel protein from Burkholderia phytofirmans PsJN

 Score =  132 bits (331), Expect = 3e-35
 Identities = 119/424 (28%), Positives = 200/424 (47%), Gaps = 44/424 (10%)

Query: 47  GLLGVAFDKAVDWVQQQRFSALAQVADY-WILVWPLAFILSAALAMLGYYLVRRFAPEAG 105
           GL+ VA+ + +D+   +    L  VA Y W     L  +++ A++ +  +L  RF P + 
Sbjct: 33  GLVAVAYARLIDFGYSE---FLQYVARYRW-----LPLLVTPAISAICVWLTLRFFPGSE 84

Query: 106 GSGIPEIEGALEE--------LRPVRWWRVIPVKFIGGMGTLGAGMVLGREGPTVQMGG- 156
           GSGIP++   L +        L P      I V F+  +G    G  +GREGPT+ +G  
Sbjct: 85  GSGIPQVIATLHDRGGIGERLLTPGILLGKILVSFLAMLG----GFTIGREGPTIHVGAA 140

Query: 157 ---NVGRMVLDIFR-MRGAEARHSLLATGAAAGLSAAFNAPLAGILFIIEEMRPQFRYNL 212
              N+       FR MRG      L   GAAAGLSAAFNAPLAG++F IEE+   F    
Sbjct: 141 LMFNLRSFYPKRFRAMRGGALERRLALAGAAAGLSAAFNAPLAGVVFAIEELTRSFEQRT 200

Query: 213 ISIKAVFIGVIMSSVVFQLFNGEGSVIAVGKLSSAPINTLWLYLVL-GAIFGAVGVMFNA 271
             +  +   +I + +V     G  +      + +   + L + +VL G + G+ G +F  
Sbjct: 201 SGV--LITAIIFAGIVSLGIQGNYTYFGTIDIGTGFPDLLAVAVVLIGVVAGSAGGIFCW 258

Query: 272 LVFRTQD-MFARLHGGKMRKILLMGGLLGGICGILGLIQPEAAGG---GFGLIPIAAAGN 327
           L+  T+  M + +   +  + +L G   G +   +G+     +GG   G G +      +
Sbjct: 259 LLLNTRRWMPSIILDCRSHRPILFGAGCGLVIAAIGVF----SGGHTFGSGYVEARDMLD 314

Query: 328 YSVGMLMFIFITRVITTLLCFGSGAPGGIFAPMLALGTLFGTAFGLAGGHLFPEYGIEAG 387
               + +   + ++ + +  +  GAPGG+FAP LA+G   G A  L    +      +  
Sbjct: 315 GRAHLTILYPVLKMASMIGSYLPGAPGGLFAPSLAIGAGIGNALHLVFSQM------QLP 368

Query: 388 TFAIAGMGALFAATVRAPLTGIVLVLEMTDNYQLILPMIITCLGATLVAQFLGGKPLYSS 447
                GM    AA  ++P+T  V+V+EM + + L++ ++ T L A+ V++ L   PLY +
Sbjct: 369 MLIALGMVGYLAAVTQSPITSFVIVIEMINGHALVISLMATALIASQVSR-LFAPPLYEA 427

Query: 448 ILAR 451
           +  R
Sbjct: 428 LSER 431