Pairwise Alignments

Query, 479 a.a., H(+)/Cl(-) exchange transporter ClcA from Serratia liquefaciens MT49

Subject, 474 a.a., chloride channel protein from Burkholderia phytofirmans PsJN

 Score =  140 bits (352), Expect = 1e-37
 Identities = 128/452 (28%), Positives = 209/452 (46%), Gaps = 49/452 (10%)

Query: 18  RSDAVRQLLRRDKTPVAILFMAALVGTMAGLLGVAFDKAVDW-------VQQQRFSALAQ 70
           RS A+ +  RR      + ++ A+     GL  V + + +DW       VQQQ       
Sbjct: 8   RSSAIVRRARRLWRQYGVFWLGAIA---VGLTAVLYARLIDWGYNEFRTVQQQH------ 58

Query: 71  VADYWILVWPLAFILSAALAMLGYYLVRRFAPEAGGSGIPEIEGALEELRPVRWWRVIPV 130
                  VW    I++ A+  L  +L R+F   A GSGIP++   L         R++  
Sbjct: 59  -------VWA-PLIITPAVTALAVWLTRKFFRGAEGSGIPQVIATLHSRTSAYGSRLLTF 110

Query: 131 KFIGG------MGTLGAGMVLGREGPTVQMGGNVGRMVLDIFRMRGAEARHSLLATGAAA 184
           + + G      +  LG G+ +GREGPTVQ+G  +   +  ++    A     L+  GAAA
Sbjct: 111 RILFGKIAVSFLAILG-GLTIGREGPTVQVGAALMFNLRRLYPRSNALIERQLVLAGAAA 169

Query: 185 GLSAAFNAPLAGILFIIEEMRPQFRYNLISIKAVFIGVIMSSVVFQLFNGEGSVIAVGKL 244
           GLSAAFN PLAGI+F IEE+   F      +  +   +I++ V+    NG  +     ++
Sbjct: 170 GLSAAFNTPLAGIVFAIEELTRSFEARASGV--LITAIIIAGVIALGLNGNYTYFGTIQI 227

Query: 245 SSAPINTLWLYLVLGAIF-GAVGVMFNALVFRTQDMF-ARLHGGKMRKILLMGGLLGGIC 302
            +   N L L ++L A+  G  G +F  L+  T     A L      + +    L G + 
Sbjct: 228 GAHFPNVLALAVLLTAVVTGLAGGVFGWLLLNTARWIPAPLRQLHSERPVAFAALCGFVI 287

Query: 303 GILGLIQPEAAGGGFGLIPIAAAG--NYSVGMLMFIFITRVITTLLCFGSGAPGGIFAPM 360
             +GLI   + G  FG     A G  +    + +F    ++I+ +  +  G PGGIFAP 
Sbjct: 288 AGVGLI---SGGTTFGSGYAEARGLLDGHAQLSVFYPFLKMISMVGSYLPGIPGGIFAPS 344

Query: 361 LALGTLFGTAFGLAGGHLFPEY-GIEAGTFAIAGMGALFAATVRAPLTGIVLVLEMTDNY 419
           L++G  FG         L+  +  ++       GM    AA  ++P+T  V+V+EM + +
Sbjct: 345 LSIGAGFGDL-------LYRVFQSMDLPMLIALGMVGYLAAVTQSPITSFVIVMEMINGH 397

Query: 420 QLILPMIITCLGATLVAQFLGGKPLYSSILAR 451
            L++ ++ T L ++ V++ L   PLY S+  R
Sbjct: 398 ALVISLMATALISSRVSRLL-TPPLYESLAER 428