Pairwise Alignments

Query, 198 a.a., 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD from Serratia liquefaciens MT49

Subject, 198 a.a., 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD from Ralstonia sp. UNC404CL21Col

 Score =  180 bits (456), Expect = 2e-50
 Identities = 94/187 (50%), Positives = 116/187 (62%), Gaps = 10/187 (5%)

Query: 6   GWIVGVTRVVSPHCDLRPNEEAPSLLVIHNISLPPGE----FGGPYIDRLFTGTLDPADH 61
           GW+ G  R  SP+ D RP      L+V+HNISLPP +    FG  ++   FT TLD   H
Sbjct: 11  GWVDGARRHPSPNIDARPAGMPIDLIVLHNISLPPAQSAADFGTDHVLDFFTNTLDCDAH 70

Query: 62  PYFSDIHQLRVSAHCLIRRDGEIIQYVPFDRRAWHAGVSSYQGRERCNDFSIGIELEGTD 121
           PYF  +  +RVSAH  IRR GE +Q+   D RAWHAG S + GR RCNDFS+GIE+EGTD
Sbjct: 71  PYFDQLRSVRVSAHFFIRRTGECVQFASCDARAWHAGASDFFGRTRCNDFSVGIEIEGTD 130

Query: 122 HVAFTPQQYQSLNVVTALLIRHYPTLAAHITGHSNIAPGRKTDPGPAFDWGLYLASLEQP 181
            +AFT +QY +   +   +   YP  A  I GHS+IAPGRKTDPGP FDW    A L   
Sbjct: 131 DLAFTSEQYATTASLVRAICAAYPIAA--IAGHSDIAPGRKTDPGPHFDW----AHLRAL 184

Query: 182 GGPDDAM 188
           GG + A+
Sbjct: 185 GGFNAAL 191