Pairwise Alignments

Query, 198 a.a., 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD from Serratia liquefaciens MT49

Subject, 198 a.a., N-acetyl-anhydromuranmyl-L-alanine amidase from Burkholderia phytofirmans PsJN

 Score =  184 bits (467), Expect = 9e-52
 Identities = 89/167 (53%), Positives = 115/167 (68%), Gaps = 3/167 (1%)

Query: 6   GWIVGVTRVVSPHCDLRPNEEAPSLLVIHNISLPPGEFGGPYIDRLFTGTLDPADHPYF- 64
           GW+    ++ SP+ + RP    P+L+V+HNISLPP EFGG  I  LF  TLD   HPY+ 
Sbjct: 11  GWVAAARKLPSPNFEARPEAAVPTLIVVHNISLPPNEFGGTAIAELFLNTLDCDAHPYYD 70

Query: 65  SDIHQLRVSAHCLIRRDGEIIQYVPFDRRAWHAGVSSYQGRERCNDFSIGIELEGTDHVA 124
           S +  +RVSAH +I RDG + Q+V  + RAWHAG S++ GRERCNDFSIGIELEG+D   
Sbjct: 71  SHLRGVRVSAHFVIHRDGALEQFVSCNERAWHAGPSNFFGRERCNDFSIGIELEGSDTAP 130

Query: 125 FTPQQYQSLNVVTALLIRHYPTLAAHITGHSNIAPGRKTDPGPAFDW 171
           F   QY++L+ + + L   YP  A  + GHS+IAPGRKTDPGP F+W
Sbjct: 131 FEAAQYRTLSALVSALKARYPVEA--LAGHSDIAPGRKTDPGPHFEW 175