Pairwise Alignments

Query, 399 a.a., protein transport protein HofC from Serratia liquefaciens MT49

Subject, 398 a.a., General secretion pathway protein F from Xanthomonas campestris pv. campestris strain 8004

 Score =  175 bits (443), Expect = 2e-48
 Identities = 112/395 (28%), Positives = 199/395 (50%), Gaps = 7/395 (1%)

Query: 7   FLWQAIDPHGQLREGELMSGKKNEVSQWLIEQGLQPCQINSGKRISP---GQWRGEPLIQ 63
           F +  +D HG+ R G + +         L ++   P ++      +P    ++ G+ L+ 
Sbjct: 4   FDYTVLDLHGRNRHGVISADSVRSARSLLEQRQWVPLRVEPAAATTPMRAARFSGKDLVL 63

Query: 64  FTRQLATLLQAGLPLVSGLQLLAAEHPSAAWRCLLREVSEQVRQGQPFSEVIAEQHAVFP 123
           FTRQLATL+    PL   L+ +  +      R +  +    V +G   S+ +A Q   FP
Sbjct: 64  FTRQLATLVDTA-PLEEALRTIGTQSERRGVRAVTGQTHALVVEGFRLSDAMARQGTAFP 122

Query: 124 LIYRQLIAIGELTGHLDECCLQLAQQQEAQQKLQKKVIKALRYPLFICAVALLVSILMLV 183
            +YR ++A GE  G L +   +LA   E Q +++ K+  AL YP  +   A +V I+++ 
Sbjct: 123 PLYRAMVAAGESAGALPQVLERLADLLERQAQVRSKLQSALVYPAALAMTAGVVVIVLMT 182

Query: 184 MVLPEFAGVYQSFNAPLPWFTQGLLNLSTLLIDSG-PWLAAILVCMAYTYLRRLHPQPQW 242
            V+P+    + S    LPW T+ ++ LS  L+ +G P L A ++        ++  +P  
Sbjct: 183 FVVPKVVDQFDSMGRALPWLTRAVIALSQFLLHAGIPLLVAGVIAAVVAV--QVRKRPPV 240

Query: 243 RRREQAALLRLPLIAHLIKGGCLSQIFRILAMTQQAGLSLVDGLAAAALSVDNLFYRQAI 302
           R     A+LR PL+  L++    +++ R LA+   +GL L++GL  AA +VDN   R A 
Sbjct: 241 RLAIDRAILRAPLLGRLLRDLHAARMARTLAIMVNSGLPLMEGLMIAARTVDNHALRLAT 300

Query: 303 DNIRQQISQGQTFHRALEQQALFPTLCQQLVRVGEESGSLDTLLGKLAAWHEQQTFELAD 362
           D++   I +G +   A+++  +FP     +   GE SG L  +L + A + E++      
Sbjct: 301 DSMVTAIREGGSLGAAMKRAGVFPPTLLYMASSGENSGRLAPMLERAADYLEREFESFTT 360

Query: 363 TLAQTLEPLLMLVVGGIVGTLVIAMYLPIFQLGNV 397
                LEPL+++++GG+V  +V+++ LPI Q   +
Sbjct: 361 AAMSLLEPLIIVLLGGVVAVIVLSILLPILQFNTL 395