Pairwise Alignments

Query, 399 a.a., protein transport protein HofC from Serratia liquefaciens MT49

Subject, 410 a.a., fimbrial assembly protein PilC-like from Synechococcus elongatus PCC 7942

 Score =  183 bits (464), Expect = 9e-51
 Identities = 110/401 (27%), Positives = 209/401 (52%), Gaps = 13/401 (3%)

Query: 7   FLWQAIDPHGQLREGELMSGKKNEVSQWLIEQGLQPCQINSGKRISPGQWRG-------- 58
           ++ Q  D  G LR+  + +G   E    L +QG     I+    +S G            
Sbjct: 4   YVAQVRDSRGALRKQRIQAGNVREARVGLRQQGFLVQSIDESAGLSLGGLSSFNLEEATS 63

Query: 59  ----EPLIQFTRQLATLLQAGLPLVSGLQLLAAEHPSAAWRCLLREVSEQVRQGQPFSEV 114
               + +  F+RQL++L+ AG+P+V  L LL  +  +   R  L++++  V++G   S+ 
Sbjct: 64  KVTVKDMALFSRQLSSLVDAGVPIVRALGLLTEQTRNPKLRKTLKQINIDVQEGLNLSDS 123

Query: 115 IAEQHAVFPLIYRQLIAIGELTGHLDECCLQLAQQQEAQQKLQKKVIKALRYPLFICAVA 174
           + +   VF  +Y  +I  GE  G LD+   +L++  E   +L+ ++  A+ YP+ +  +A
Sbjct: 124 MRKFPKVFDGLYVAMIQAGETGGVLDDVLNRLSKLLEDMSRLRNQMKSAMTYPMAVFVIA 183

Query: 175 LLVSILMLVMVLPEFAGVYQSFNAPLPWFTQGLLNLSTLLIDSGPWLAAILVCMAYTYL- 233
           +LV + M + ++P FAG+++   A LP FT  LL++S LL     W   ++      ++ 
Sbjct: 184 ILVFLGMTIFIIPTFAGIFEDQGAELPGFTLLLLSISQLLRTPIFWGFFLIFLFGSIFVF 243

Query: 234 RRLHPQPQWRRREQAALLRLPLIAHLIKGGCLSQIFRILAMTQQAGLSLVDGLAAAALSV 293
           ++ +  P  R      +LRLP++  +I+    ++  R      +AG+ ++  L     + 
Sbjct: 244 KQYYSTPPGRLSVDNLVLRLPVLGEMIQKAATARFCRTFGSLTRAGVPIMTALEIVRDTA 303

Query: 294 DNLFYRQAIDNIRQQISQGQTFHRALEQQALFPTLCQQLVRVGEESGSLDTLLGKLAAWH 353
            N    ++ID  R ++  G     AL +  +FP +   ++ +GEE+G LDT++ K+A ++
Sbjct: 304 GNQAIARSIDAARMEVQTGGMMSVALSRYRVFPLMALSMITIGEETGELDTMVNKVADFY 363

Query: 354 EQQTFELADTLAQTLEPLLMLVVGGIVGTLVIAMYLPIFQL 394
           E +  +    L   LEP+++++VGGIVG++++AMYLP+F +
Sbjct: 364 EDEVEQAVKGLTSLLEPIMIVLVGGIVGSILLAMYLPMFSI 404