Pairwise Alignments

Query, 399 a.a., protein transport protein HofC from Serratia liquefaciens MT49

Subject, 421 a.a., type II secretion system F family protein from Ralstonia sp. UNC404CL21Col

 Score =  197 bits (500), Expect = 6e-55
 Identities = 116/403 (28%), Positives = 215/403 (53%), Gaps = 14/403 (3%)

Query: 3   TLRLFLWQAIDPHGQLREGELMSGKKNEVSQWLIEQGLQPCQINS-----GKRISPGQWR 57
           T  +F W+  D  G++ +GE+ +    EV+  L +QGL   +        GK+I+P    
Sbjct: 26  TQYIFEWEGKDRKGKIFKGEMRAESITEVNAILRKQGLSITKSKRRRAARGKKITP---- 81

Query: 58  GEPLIQFTRQLATLLQAGLPLVSGLQLLAAEHPSAAWRCLLREVSEQVRQGQPFSEVIAE 117
            + +  FTRQL+T+L+AG+PL+  + ++A  H +  +  LL E+   +  G   ++    
Sbjct: 82  -KDVAYFTRQLSTMLKAGVPLLQSVDIIAKGHANPNFTQLLTEIRVDIESGSSMAQAFRR 140

Query: 118 QHAVFPLIYRQLIAIGELTGHLDECCLQLAQQQEAQQKLQKKVIKALRYPLFICAVALLV 177
               F  +Y  LI  GE  G LD    +L+   E    L+ ++  A+ YP+ +  VA LV
Sbjct: 141 HPKYFDTLYCNLIDAGEQGGILDALLERLSLYMEKSIALKAQIKSAMIYPISVLTVAFLV 200

Query: 178 SILMLVMVLPEFAGVYQSFNAPLPWFTQGLLNLSTLLIDSGPWLAAILVCMA--YTYLRR 235
           ++++++ V+P F GV+ SF A LP  T  ++ +S   +    W   I   +     ++R 
Sbjct: 201 TVVLMIFVVPAFKGVFSSFGATLPAPTLVVMGISDFFVQW--WYIIIFAPLIGIVLFMRA 258

Query: 236 LHPQPQWRRREQAALLRLPLIAHLIKGGCLSQIFRILAMTQQAGLSLVDGLAAAALSVDN 295
                  +R     +LR+P+   +I+   +++  R LA    AG  LV+ + + A +  N
Sbjct: 259 FKRSENVQRSTHRWILRMPIFGSIIRKATIARWTRTLATMFAAGTPLVESMESVAGAAGN 318

Query: 296 LFYRQAIDNIRQQISQGQTFHRALEQQALFPTLCQQLVRVGEESGSLDTLLGKLAAWHEQ 355
             Y  A   I+Q +  G +   A++   +F  +  Q+ ++GEESG+LD++L K+A ++E+
Sbjct: 319 WVYHDATIEIQQAVRIGTSLTNAMQATHVFDNMVLQMTQIGEESGALDSMLLKVAEFYER 378

Query: 356 QTFELADTLAQTLEPLLMLVVGGIVGTLVIAMYLPIFQLGNVL 398
           +  +    ++  +EP++++++G ++G +V+AMYLPIF+LG V+
Sbjct: 379 EVDDAVANISALIEPIIIVILGVLIGGMVVAMYLPIFKLGQVV 421