Pairwise Alignments

Query, 453 a.a., UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase from Serratia liquefaciens MT49

Subject, 462 a.a., UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate-D-alanyl-D-alanyl ligase from Marinobacter adhaerens HP15

 Score =  312 bits (800), Expect = 1e-89
 Identities = 193/437 (44%), Positives = 260/437 (59%), Gaps = 12/437 (2%)

Query: 20  ADCQIVEVTTDTRQVTAGCLFVALKGERFDAHDFAVDAVAAGAGALLV-SKRLLVDVPQL 78
           A      V+TDTR +  G LFVAL+GE FD H F   A+  GA  L+V +    + +PQL
Sbjct: 24  ASVSFAGVSTDTRTLEPGQLFVALRGENFDGHRFLQQAMDKGAVGLVVDTPDTNLALPQL 83

Query: 79  VVKDTRLALGQLAAWVRKQVPARVVALTGSSGKTSVKEMAAAILRECGEVLYTAGNFNND 138
           VV +T  AL +LAA  R++  A ++A+TGSSGKT+VKEM AAIL + G+ L T GN NN 
Sbjct: 84  VVNETLEALARLAAANREESTAAILAITGSSGKTTVKEMCAAILSQMGKTLSTKGNLNNH 143

Query: 139 IGVPLTLLRLQPQHDFAVIELGANHIGEIAYTTALTCPQTALVNNLAAAHLEGFGSLAGV 198
           IGVPLTL  L P+H + VIELGA+ +GEIA+T AL  P+ A++ N   AHLEGFGS   +
Sbjct: 144 IGVPLTLFGLSPEHQYGVIELGASGLGEIAHTVALAKPRVAILTNAGEAHLEGFGSYENI 203

Query: 199 AQAKGEIFTGLPADGVAIINADNNDWPHWQNMLEGKTVWRFSPQAAEGVDFFASDVQVNG 258
             AKGEI  G+ +DG+ ++N D+  +  W++    + V   S   AE       D Q  G
Sbjct: 204 VLAKGEIIDGVASDGLMVLNGDDPAFAQWRSRAGARRVAGVSRLGAEADYHAVIDGQDAG 263

Query: 259 EGTQFTLHSPFG-TAPIALPLPGRHNVANALAATALAMSAGASLEAVRQGLKQLQAVPGR 317
             T F +  P G    + L L G HN+ N L A A     GAS +A+  GL  +  V GR
Sbjct: 264 TRT-FQVSGPDGWLCRVTLGLEGDHNITNMLLAIAATRELGASDQAIVAGLASVAPVKGR 322

Query: 318 LFPIALSAGKLLLDDSYNANVGSMTAAAQVLAEMPGYRVMVVGDMAELGAEAEECHRQVG 377
           L  + LS    L+DDSYNAN  SM AA  VLA   G ++ V+G MAELGA+A   HR+VG
Sbjct: 323 LQVLELSPEMTLIDDSYNANPSSMKAALGVLAGRAGQKIAVLGAMAELGAKANALHREVG 382

Query: 378 EAARLAGVDKVLGVGPLSQTLIAAAGNGEH----FQDKAAVTARVAELLSEHAVITVLIK 433
             AR  G+D+++ VGP  +    A G GE        + AV + + +   ++  +TVL+K
Sbjct: 383 VCAREHGIDRLITVGPGCEGY--ADGFGESTELGLSHEQAVESAIGD---KNTPLTVLVK 437

Query: 434 GSRSAAMEQVVRALQEK 450
           GSRS+AME+VV  ++EK
Sbjct: 438 GSRSSAMERVVEGIKEK 454