Pairwise Alignments

Query, 388 a.a., Na+/H+ antiporter NhaA from Serratia liquefaciens MT49

Subject, 408 a.a., sodium:proton antiporter from Azospirillum brasilense Sp245

 Score =  369 bits (946), Expect = e-106
 Identities = 198/383 (51%), Positives = 259/383 (67%), Gaps = 14/383 (3%)

Query: 5   IRQFLRQEAAGGIILIVAAIIALIMANTPAQGIYHAFLNLPVMVKVSSLEIAKPLLLWIN 64
           IR F+  EA+GGI+L+VAA +AL++AN+P    Y   L+  ++     L I      WIN
Sbjct: 16  IRNFMSNEASGGILLMVAAALALVVANSPLSAAYFDTLHTYIL----GLSIGH----WIN 67

Query: 65  DGLMAIFFLVVGLEVKRELMQGSLAGRDKAVFPAIAALGGMLAPALIYLMFNGADEVTRQ 124
           DGLMAIFFL+VGLE+KRE++ G L+     + P +AA GGML PAL+YL FN  +  T  
Sbjct: 68  DGLMAIFFLLVGLEIKREMLDGQLSNWSCRILPGVAAAGGMLVPALVYLAFNAGNPATVN 127

Query: 125 GWAIPAATDIAFALGVMALLGNRVPTSLKVFLLALAIIDDLGVIVIIALFYTHEVSMAAL 184
           GWAIPAATDIAFALGV++LLG RVP SLK+FL ALAIIDDLG ++IIALFYT ++S+ AL
Sbjct: 128 GWAIPAATDIAFALGVLSLLGPRVPVSLKIFLTALAIIDDLGAVIIIALFYTADLSLPAL 187

Query: 185 GVAAAAVAVLAFMNWRGVGKTSLYMIVGLVLWVAILKSGVHATLAGVIVGFMIPLNVKKG 244
           GVAA  +A L  +N  GV     Y+++G  LW A+L SGVHATLAGV +   IPL    G
Sbjct: 188 GVAALLLAALIGLNRFGVRSLLPYLVLGAGLWGAVLLSGVHATLAGVTLALTIPLRPASG 247

Query: 245 P-----SPSETLEHELHPWVAFMILPLFAFANAGVSLQGVSLSGLTSLLPVGIAAGLFIG 299
                 +P   LEH +HPWVAF+I+P+F FANAGVS  G+  S LT  LP+GIA GLF+G
Sbjct: 248 AAADPHAPLLRLEHAIHPWVAFLIVPVFGFANAGVSFAGMDASILTGSLPLGIALGLFLG 307

Query: 300 KPLGIFTFSLLAVKLGIARLPEGIGFKQVFAVSVLCGIGFTMSIFIASLAFGDADVVLST 359
           K +G+F  + L ++LG A +P G    Q++ V++LCGIGFTMS+FI +LAF      L  
Sbjct: 308 KMVGVFGTAWLTIRLGFAGMPAGATTAQLYGVALLCGIGFTMSLFIGALAF-PTSPELGD 366

Query: 360 YSRLGILIGSTTAAVVGYALLRM 382
             ++G+  GS  +A  G  +LR+
Sbjct: 367 AVKVGVFAGSILSATAGALVLRL 389