Pairwise Alignments

Query, 388 a.a., Na+/H+ antiporter NhaA from Serratia liquefaciens MT49

Subject, 422 a.a., sodium/proton antiporter, NhaA family (TC 2.A.33.1.1) from Sphingomonas koreensis DSMZ 15582

 Score =  341 bits (874), Expect = 3e-98
 Identities = 187/387 (48%), Positives = 248/387 (64%), Gaps = 8/387 (2%)

Query: 5   IRQFLRQEAAGGIILIVAAIIALIMANTPAQGI-YHAFLNLPVMVKVSSLEIAKPLLLWI 63
           +R F++ EAAGGI+LI AA +A+++AN P     Y   L+      +S       + LWI
Sbjct: 13  LRTFMKSEAAGGILLIAAAALAMLVANLPGLSADYFHLLHWETGPVISPKYGPMTVHLWI 72

Query: 64  NDGLMAIFFLVVGLEVKRELMQGSLAGRDKAVFPAIAALGGMLAPALIYLMFNGADEVTR 123
           ND LMA+FFL+VGLE+KRE + G L+  D    P +AA  GM+ PALIYL   G   +  
Sbjct: 73  NDALMAVFFLLVGLEIKREFVDGQLSSWDDRRLPVVAAAAGMVVPALIYLAITGGGPLA- 131

Query: 124 QGWAIPAATDIAFALGVMALLGNRVPTSLKVFLLALAIIDDLGVIVIIALFYTHEVSMAA 183
            GWAIPAATDIAFA+GV+ALLG R P SLK+FL  +AI+DD+G + IIAL YT  +   A
Sbjct: 132 PGWAIPAATDIAFAIGVLALLGKRAPASLKLFLTTVAIVDDMGAVAIIALAYTKSLGSLA 191

Query: 184 LGVAAAAVAVLAFMNWRGVGKTSLYMIVGLVLWVAILKSGVHATLAGVIVGFMIPLNVKK 243
           L   A  + V+  +N  GV K   Y+++G +LW  +  SGVHAT+AGV+   MIP+    
Sbjct: 192 LAAGALVLVVMHVLNRSGVTKLWPYLLLGALLWYFVFLSGVHATVAGVLTAMMIPVKPSP 251

Query: 244 G-----PSPSETLEHELHPWVAFMILPLFAFANAGVSLQGVSLSGLTSLLPVGIAAGLFI 298
           G      SP   LEH L PWVAF+I+PLF FANAGVSL G+S + L + LP+GIAAGLFI
Sbjct: 252 GAPDAADSPLHILEHALAPWVAFVIVPLFGFANAGVSLAGMSPAILLAPLPLGIAAGLFI 311

Query: 299 GKPLGIFTFSLLAVKLGIARLPEGIGFKQVFAVSVLCGIGFTMSIFIASLAFGDADVVLS 358
           GK  GIF    +A K G A  P    + Q++ V++LCGIGFTMS+FI  LAF D+  ++ 
Sbjct: 312 GKQAGIFGSVWIAAKTGFACPPGRATWTQIYGVAMLCGIGFTMSLFIGGLAFPDSPELID 371

Query: 359 TYSRLGILIGSTTAAVVGYALLRMSLP 385
              ++G+L GS  +AV G+ +LR + P
Sbjct: 372 EV-KIGVLAGSILSAVAGFLVLRFARP 397