Pairwise Alignments

Query, 302 a.a., 4-hydroxyphenylacetate catabolism regulatory protein HpaA from Serratia liquefaciens MT49

Subject, 298 a.a., Transcriptional regulator PobR, AraC family from Xanthomonas campestris pv. campestris strain 8004

 Score =  119 bits (298), Expect = 9e-32
 Identities = 81/275 (29%), Positives = 132/275 (48%), Gaps = 11/275 (4%)

Query: 28  DEVHYETFAGLAAFFGRDMQVHWHDRFFQMHFLETGKIELQLDSQHYSVQAPLFILTPPS 87
           D +H+E+    +      +  H HD   Q+ +++ G   + LD +   +     I  PP 
Sbjct: 29  DLLHWESIGARSRLHDWRIAPHRHDELAQLLYVQRGPATVHLDGRTQRIGGATVIWLPPM 88

Query: 88  VPHAFFTEPDSDGHVLTVRQELIWPLLERLYPGSNLALDMPGICLSLADAPQELTALSHY 147
             H F  +P   GH+ T+   L+   ++   P    AL  P     L  A +    L   
Sbjct: 89  CVHGFNFDPRVRGHIATLCMPLVHATVQGA-PALRQALASP----QLLAAGRSRQLLDLV 143

Query: 148 WALIRREFSQRLVGREQTLVLLAQAVFTLLLRNTTLE---DTATSGVRGE--LKLFQRFN 202
           +A +  + +++ +GRE  +   A  +     R T LE   D A +    +  L+  + F 
Sbjct: 144 FASLADDHARQRIGREAAMQAAAAQLLVWCAR-TALEKAHDHAITAAHADPGLRHLRSFQ 202

Query: 203 KMVDERFRDHLAVPDYAQALGVTESRLNDLCRRFANQPPKRLIFDRLLREAKRMLLFSAC 262
            ++D  +R H ++  YA  +G+T   LN +C+R AN    +L+  RL+ EA R L +++ 
Sbjct: 203 ALIDVHYRAHWSIARYAAQVGLTPGHLNAVCQRLANASALQLLQRRLMLEAGRSLRYTSM 262

Query: 263 TVHETAYSLGFKDPAYFARFFNRLEGCSPSTYRAA 297
           +V + A  LGF D AYF+RFF R  GCSPS +RAA
Sbjct: 263 SVQQVAADLGFFDAAYFSRFFARHAGCSPSHFRAA 297