Pairwise Alignments

Query, 284 a.a., helix-turn-helix transcriptional regulator from Serratia liquefaciens MT49

Subject, 274 a.a., AraC family transcriptional regulator from Azospirillum brasilense Sp245

 Score =  223 bits (568), Expect = 4e-63
 Identities = 107/253 (42%), Positives = 163/253 (64%), Gaps = 1/253 (0%)

Query: 21  FDIDRVPRAVFAVQGSTVNKDWEVAHHRHQKAQLIYTMRGMIRCEVENGLWLVPPQCALW 80
           FD D   R   A Q + V+ + EV  H H+K QLI  + G + C  +N +W+VPP C +W
Sbjct: 11  FDPDLTDRPAVARQLNFVDHEAEVPMHTHRKGQLILALHGAVTCTADNEIWIVPPNCGVW 70

Query: 81  MPSNVLHNAQGTGATECYALFVDQAAIAGLPTSCCTLAVSPLLRELLLQASGFDPLYDEQ 140
           +P  V H+A+ T       LFV+  A AGLP  CCTL+VSPL+RE++ + +     Y   
Sbjct: 71  IPGGVPHSARATANARLNYLFVEPGA-AGLPADCCTLSVSPLIREMVDRLAREPADYPSD 129

Query: 141 GAEGRLIGVLLDQLAAAPIENLHLPVSNDARIRQLTERLLADPADKATLSQWAQRIGMSE 200
           G   RL  V LD+LA  P E  +LP+S++ +IR + + L   P+D++T ++WA+R+ +SE
Sbjct: 130 GHAARLARVALDELADMPRERFNLPISSNPKIRAIADALTLAPSDRSTSAEWAKRVAVSE 189

Query: 201 RTLNRTLQQQMGMSFGHWRRQLHVMLALQRLTKGETVQRVALDLGYESASGFVTMFRKAV 260
           R+L R + ++ G++FG WR+QLH+++AL+ L  G  VQ VA +LGY+S + F+TMF+KA+
Sbjct: 190 RSLARLMIRETGLTFGRWRQQLHLVIALRELASGAAVQDVAAELGYDSVNAFITMFKKAL 249

Query: 261 GKPPARYLAEKTA 273
           G  PA+Y A++ A
Sbjct: 250 GSTPAQYFAQRRA 262