Pairwise Alignments

Query, 284 a.a., helix-turn-helix transcriptional regulator from Serratia liquefaciens MT49

Subject, 254 a.a., AraC-type DNA-binding domain-containing proteins from Sphingomonas koreensis DSMZ 15582

 Score =  169 bits (427), Expect = 7e-47
 Identities = 82/244 (33%), Positives = 136/244 (55%), Gaps = 1/244 (0%)

Query: 24  DRVPRAVFAVQGSTVNKDWEVAHHRHQKAQLIYTMRGMIRCEVENGLWLVPPQCALWMPS 83
           D V R V A+ G      +E+A HRH+++Q +Y   G++     +G W+ PP+ A+W+P+
Sbjct: 9   DDVARPVIAI-GHAFPDSFELAEHRHRRSQFLYAATGVMAVSTPDGAWVAPPERAVWIPA 67

Query: 84  NVLHNAQGTGATECYALFVDQAAIAGLPTSCCTLAVSPLLRELLLQASGFDPLYDEQGAE 143
              H+ +  GA +  ++ V+     G    C  + VSPLLR LL  A+G  P Y+  G +
Sbjct: 68  GTPHSVRMVGAVQTRSVLVEPGECPGRGEKCQIVGVSPLLRHLLSAAAGVAPDYEIDGRD 127

Query: 144 GRLIGVLLDQLAAAPIENLHLPVSNDARIRQLTERLLADPADKATLSQWAQRIGMSERTL 203
           G ++ +L+ ++  AP+  L +P      + +     L  P+  AT+ +WA  + M+ R+ 
Sbjct: 128 GLVMRLLMAEIDQAPMIPLAVPFPTHPALARRCHAFLERPSAAATIDEWADALAMNRRSF 187

Query: 204 NRTLQQQMGMSFGHWRRQLHVMLALQRLTKGETVQRVALDLGYESASGFVTMFRKAVGKP 263
            R  +++ GMSF  WR+Q  + +AL +L  GE V  +A DLGY+    F TMF++ +G P
Sbjct: 188 TRLFRRETGMSFAEWRQQACLSVALPKLASGEPVTSIAYDLGYDGPGNFSTMFKRVLGAP 247

Query: 264 PARY 267
           P+RY
Sbjct: 248 PSRY 251