Pairwise Alignments

Query, 284 a.a., helix-turn-helix transcriptional regulator from Serratia liquefaciens MT49

Subject, 270 a.a., transcriptional regulator, AraC family from Sphingomonas koreensis DSMZ 15582

 Score =  251 bits (642), Expect = 9e-72
 Identities = 123/249 (49%), Positives = 165/249 (66%), Gaps = 1/249 (0%)

Query: 24  DRVPRAVFAVQGSTVN-KDWEVAHHRHQKAQLIYTMRGMIRCEVENGLWLVPPQCALWMP 82
           D VPR V      T   +  E+  HRH K Q+++  RG + CEVE GLW+VPP+ A+W+P
Sbjct: 17  DNVPRPVVTFGIVTTEFEGLELDFHRHAKGQIMFVQRGALSCEVEGGLWIVPPRSAIWIP 76

Query: 83  SNVLHNAQGTGATECYALFVDQAAIAGLPTSCCTLAVSPLLRELLLQASGFDPLYDEQGA 142
              LH  + TGA E Y+ F       GLP++CC ++VSPLLRELL++ +    LY+E   
Sbjct: 77  GGALHAIKATGAFEGYSAFAAAEVSRGLPSTCCAVSVSPLLRELLVRTASLPALYEENDI 136

Query: 143 EGRLIGVLLDQLAAAPIENLHLPVSNDARIRQLTERLLADPADKATLSQWAQRIGMSERT 202
             RL GVLLD+LAAA +E+LHLP+  D R+R++   +L  PA + TL  WA+R GMS RT
Sbjct: 137 NARLTGVLLDELAAAQVEDLHLPMPADPRLRRIAGEMLEAPASRGTLQSWAERAGMSVRT 196

Query: 203 LNRTLQQQMGMSFGHWRRQLHVMLALQRLTKGETVQRVALDLGYESASGFVTMFRKAVGK 262
           L R + ++ GMSFG WR+QL V+LA++ L  G ++Q VA DLGYES   FVTMFRKA+G 
Sbjct: 197 LERLIGRETGMSFGRWRQQLGVVLAVKWLAGGASIQAVAADLGYESVPSFVTMFRKALGT 256

Query: 263 PPARYLAEK 271
            P RY+AE+
Sbjct: 257 SPGRYMAER 265