Pairwise Alignments

Query, 284 a.a., helix-turn-helix transcriptional regulator from Serratia liquefaciens MT49

Subject, 298 a.a., transcriptional regulator from Herbaspirillum seropedicae SmR1

 Score =  220 bits (561), Expect = 3e-62
 Identities = 114/258 (44%), Positives = 160/258 (62%), Gaps = 3/258 (1%)

Query: 22  DIDRVPRAVFAVQGSTVNKDWEVAHHRHQKAQLIYTMRGMIRCEVENGLWLVPPQCALWM 81
           D DR+  AV A++  T   + E   H H+K QL+  +RG + CE   G+W+VPPQ A+W+
Sbjct: 12  DPDRLDAAVTALRVHTSQDERETPLHSHRKGQLVVALRGAVTCETAQGMWIVPPQSAVWI 71

Query: 82  PSNVLHNAQGTGATECYALFVDQAAIAGLPTSCCTLAVSPLLRELLLQASGFDPLYDEQG 141
           P  V H+ + T   +   LF+   A A +P  CCTLA+SPLL +++   +     Y    
Sbjct: 72  PPGVPHSNRVTLDGQLCFLFIAPQA-ASMPEQCCTLALSPLLVQMICHLAEQRQDYAPHE 130

Query: 142 AEGRLIGVLLDQLAAAPIENL--HLPVSNDARIRQLTERLLADPADKATLSQWAQRIGMS 199
              RL  VL+++L  +    L  HLP    +R+R +   L   PAD+ T++QW QR  MS
Sbjct: 131 RTARLAAVLVEELEHSQRHALPLHLPAPQHSRLRAIARHLAEHPADRRTVAQWGQRHAMS 190

Query: 200 ERTLNRTLQQQMGMSFGHWRRQLHVMLALQRLTKGETVQRVALDLGYESASGFVTMFRKA 259
           ER+  R +Q + GMSFG WRRQ+H+MLALQRL  G +VQRV+ DLGY+S S F+TMFRK 
Sbjct: 191 ERSFARFVQAETGMSFGRWRRQIHLMLALQRLASGSSVQRVSQDLGYDSVSAFITMFRKT 250

Query: 260 VGKPPARYLAEKTAADRA 277
           +GKPPARY+A++ A  +A
Sbjct: 251 LGKPPARYMAQRQAQRQA 268