Pairwise Alignments

Query, 284 a.a., helix-turn-helix transcriptional regulator from Serratia liquefaciens MT49

Subject, 273 a.a., AraC family transcriptional regulator from Herbaspirillum seropedicae SmR1

 Score =  172 bits (437), Expect = 6e-48
 Identities = 96/259 (37%), Positives = 145/259 (55%), Gaps = 1/259 (0%)

Query: 19  PLFDIDRVPRAVFAVQGSTVNKDWEVAHHRHQKAQLIYTMRGMIRCEVENGLWLVPPQCA 78
           P+  +D + R V A  G+          H H++AQL+Y + G+++    +G W+VPPQ A
Sbjct: 15  PIDQVDGIARPVVAA-GAQYRHGAVQPWHSHRRAQLLYGLSGLMQVITADGAWVVPPQHA 73

Query: 79  LWMPSNVLHNAQGTGATECYALFVDQAAIAGLPTSCCTLAVSPLLRELLLQASGFDPLYD 138
           +W+PS   H ++   A    + F++      + +SC  LAV PLLRELL++A+  DP Y 
Sbjct: 74  VWIPSGREHQSRMLQAVTTCSAFIEPEHAPRVASSCQVLAVRPLLRELLIEATRMDPHYV 133

Query: 139 EQGAEGRLIGVLLDQLAAAPIENLHLPVSNDARIRQLTERLLADPADKATLSQWAQRIGM 198
               E  LI +LLD++  A     H+P+  + R+ +L  R LA P+ ++  +QWA ++ +
Sbjct: 134 LHSREENLIRLLLDEIGRAEEIPAHVPLPPEPRLGELCHRFLAAPSIRSGPAQWALQLHI 193

Query: 199 SERTLNRTLQQQMGMSFGHWRRQLHVMLALQRLTKGETVQRVALDLGYESASGFVTMFRK 258
           SERT +R    Q GM F  WR +  VM A+ RL  G+ V  +A DLGYE  + F TMFRK
Sbjct: 194 SERTFSRRFLAQTGMGFQQWRLRACVMYAISRLALGQPVTTIAYDLGYERPAAFSTMFRK 253

Query: 259 AVGKPPARYLAEKTAADRA 277
             G  P+ + A + A  RA
Sbjct: 254 MTGHMPSAHPAAQAAPARA 272