Pairwise Alignments

Query, 284 a.a., helix-turn-helix transcriptional regulator from Serratia liquefaciens MT49

Subject, 271 a.a., AraC family transcriptional regulator from Herbaspirillum seropedicae SmR1

 Score =  160 bits (405), Expect = 3e-44
 Identities = 95/255 (37%), Positives = 138/255 (54%), Gaps = 11/255 (4%)

Query: 21  FDIDRVPRA---VFAVQGSTVNKDWEVAHHRHQKAQLIYTMRGMIRCEVENGLWLVPPQC 77
           FD++  P     VF V G        V  H+H +  LIY   G++R + E+G WLVPP  
Sbjct: 13  FDLEARPEKELPVFGVSGRYPAGS-VVPMHQHPQGHLIYADSGLLRVQAESGQWLVPPTA 71

Query: 78  ALWMPSNVLHNAQGTGATECYALFVDQAAIAGLPTSCCTLAVSPLLRELLLQASGFDPLY 137
           A+W+ S V H+       + Y LFV Q   A LP   C + VSPLLREL++  +      
Sbjct: 72  AVWLRSGVAHSLAMPVTLQAYGLFVRQDVCARLPAFDCVVHVSPLLRELIITLA--QARE 129

Query: 138 DEQGAEG-RLIGVL-LDQLAAAPIENLHLP---VSNDARIRQLTERLLADPADKATLSQW 192
           +   A+  RL+G L ++++   P    HLP      D  + +L + LL DP D AT ++W
Sbjct: 130 ENMSAKRMRLLGALVMEEVLTQPTLPFHLPWPMSETDGPMARLCQALLDDPGDMATAAEW 189

Query: 193 AQRIGMSERTLNRTLQQQMGMSFGHWRRQLHVMLALQRLTKGETVQRVALDLGYESASGF 252
           A R+ M ++T +R   Q  GM+FG WR+QL +M +L  L +G  + +VAL  GY+S S +
Sbjct: 190 ADRLAMGQKTFHRRFLQSTGMTFGKWRQQLRLMSSLPLLMQGMPITQVALASGYDSHSAY 249

Query: 253 VTMFRKAVGKPPARY 267
            T F K  GKPP+ +
Sbjct: 250 TTAFGKQFGKPPSAF 264