Pairwise Alignments

Query, 1137 a.a., DEAD/DEAH box helicase family protein from Serratia liquefaciens MT49

Subject, 979 a.a., DEAD/DEAH box helicase from Vibrio cholerae E7946 ATCC 55056

 Score = 80.5 bits (197), Expect = 6e-19
 Identities = 90/393 (22%), Positives = 159/393 (40%), Gaps = 56/393 (14%)

Query: 338 QQRETRLPLNSIPHVKDNEGKAVAGRLYQLETIARVSERFTNKYRQSLIVQATGTGKTRV 397
           QQ + +  +  +   +D + +  A    Q+E +  ++      + + L+V ATG GKT +
Sbjct: 194 QQAKKQHGMPILADSQDEQSEPPAPNAVQVEALTALNATRAQGFSRGLVVLATGMGKTWL 253

Query: 398 AIALSKLMIDARWVKRILFLCDRRELRKQAANAFNQFTNEPLYVVGKSKKEDRQNARIY- 456
           A A   L   +    ++LF+  R E+  QA   F Q        +     ++ Q   ++ 
Sbjct: 254 A-AFDALQTQST---KVLFVAHREEILLQAEKTFCQLIPNAKTGLYNGVTQNTQAMLLFA 309

Query: 457 -IATYPGMMKIMDHFDVGYFDLIIADESHRSIYNVYGDVFKYFDA-LQIGLTATPIDMVS 514
            +AT  G    +  F   +FD I+ DE H +    Y ++  YF     +GLTATP     
Sbjct: 310 SVATI-GKQNHLQRFAADHFDYIVVDEFHHAAARSYRNLLTYFKPKFLLGLTATPERSDQ 368

Query: 515 KTTFGLFGCEGRIPTANYSLEDAIADNNLVPYEVVTHTTEFLREGIKREKLSDQQIRELE 574
                L  C+  +     +L   I +  LVP++           GI  + ++ Q+I    
Sbjct: 369 ADILSL--CDSNL-VFERNLVHGIDEKILVPFDY---------HGIYDQAVNYQEIPWRN 416

Query: 575 DQGVDPNTLEFEGKSLDEAIYNNDTNRHILRNLMENGLKDADGQLPGKTIIFARNHKHAL 634
            +        F+  SLD A+       H+ ++  +        +   +T+ F  + KHA 
Sbjct: 417 GK--------FDPDSLDNALATQRRAEHVYQHWHQ--------KKQTRTLAFCVSKKHA- 459

Query: 635 LLNKLFDEMYPQFAGHFC-----QVIDNYDPRAEQLIDDFKGLDESTNKELTLAISVDML 689
                       F   FC     + I  Y     +     + LD     ++ +  SVD+ 
Sbjct: 460 -----------DFMAEFCLSKGIKAIAVYSDSKVRRNQALQWLDSG---KIDILFSVDLF 505

Query: 690 DTGIDVPEIVNLVFAKPVKSKVKFWQMIGRGTR 722
           + G D+P I  ++  +P +SK+ F Q +GRG R
Sbjct: 506 NEGTDLPAIDTILMLRPTESKILFLQQLGRGLR 538