Pairwise Alignments

Query, 1137 a.a., DEAD/DEAH box helicase family protein from Serratia liquefaciens MT49

Subject, 942 a.a., Type I restriction enzyme EcoR124II R protein (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score = 57.4 bits (137), Expect = 5e-12
 Identities = 56/210 (26%), Positives = 94/210 (44%), Gaps = 35/210 (16%)

Query: 363 RLYQLETIARVSERFTNKYRQSLIVQATGTGKTRVAIALSKLMIDARWVKRILFLCDRRE 422
           R YQ   + ++ +R  N      I   TG GKT  +   ++L+ +   V +++F+ DR +
Sbjct: 244 RPYQFYAVEKILDRVQNSNDNGYIWHTTGAGKTLTSFKAAQLVSELDDVDKVMFVVDRHD 303

Query: 423 LRKQAANAFNQFTNEPLYVVGKSKKED-----RQNARIYIAT------------YPGMMK 465
           L  Q  + +  F  EP  V      ++     + N++I I T            Y   + 
Sbjct: 304 LDTQTQSEYEAF--EPGAVDSTDNTDELVKRLQSNSKIIITTIQKLNAAVSKTWYSSKID 361

Query: 466 IMDHFDVGYFDLIIADESHRSIY-NVYGDVFKYFDALQI-GLTATPI----DMVSKTTFG 519
            + H  +    ++I DE HRS + + +  + K+F   QI G T TPI     +   TT  
Sbjct: 362 AIRHSRI----VMIFDECHRSHFGDSHKKIMKFFGNAQIFGFTGTPIFTENAVDGHTTKE 417

Query: 520 LFG-CEGRIPTANYSLEDAIADNNLVPYEV 548
           +FG C        Y ++DAIAD N++ + V
Sbjct: 418 IFGNC-----LHKYLIKDAIADENVLGFLV 442