Pairwise Alignments

Query, 522 a.a., ABC transporter substrate-binding protein from Serratia liquefaciens MT49

Subject, 540 a.a., ABC transporter substrate-binding protein from Pseudomonas fluorescens FW300-N2C3

 Score =  234 bits (597), Expect = 6e-66
 Identities = 157/501 (31%), Positives = 251/501 (50%), Gaps = 13/501 (2%)

Query: 16  SSALAATPPNTLVVVQSLDDIVSLDPAEANELSSIQTVPSLYQRLVQADRDDPAKVEPVL 75
           S A   TPP+ LVV  S+ +++SLDPA A  L   +   ++Y  L++ D   P  + P L
Sbjct: 26  SLAQGETPPDQLVVGMSMINLLSLDPAAATGLEVAEVNANVYDMLLEQDAAQPDTLIPAL 85

Query: 76  AESWQGNAAAKTLTIKLRPQATFASGNPLTADDVIFSFSRAVKMNKSPAFILNVLGWQPD 135
           A++W  +     LT +LR    F SG PLTA DV +S  R V +N++ A      G+  D
Sbjct: 86  AKTWDISPDRMRLTFQLRDDVRFHSGAPLTAQDVAWSLQRVVTLNRALASTWKAYGFTAD 145

Query: 136 NIDAQLKKIDDHSLQLSWTANVSPAVALNILST-PIASIVDSKAVQPNAKDGDYGNAWLK 194
           N+   ++    H+  +       P + LN L+T P A I+D      +    D G AWL 
Sbjct: 146 NVVKLMRAEGPHTFVMELPRVTDPMLVLNTLATSPSAFIIDRSVALQHQVGDDQGAAWLA 205

Query: 195 MHSAGSGPFKMRVYQPHQAIVLDANPTSPGSKPLLKSIIIKSVPDSATRRLLIQQGDADV 254
            H+AGSG FK+ +++ +  I++  N         L+ +I++++ +S   RL++++GD DV
Sbjct: 206 THTAGSGAFKLDIWRANDVILMSRNDDYWRGAAKLRRVIMRNMTESQALRLMVERGDLDV 265

Query: 255 ARELGPDQTVALKNQPGVKVLEIPSAEQNYLVFNTGNTANPLLKNPAFWEAARYLIDYQG 314
           AR +      AL     V++  I      Y+     +   PL ++    +A R LIDYQG
Sbjct: 266 ARGMAATDIKALGKVDEVRIQSIARGTLYYVAM---SMQQPLFQDIRVRQAIRLLIDYQG 322

Query: 315 ITKDLLKGQYFVHQSFLPVGLPGALKDNPFSFDPAKAKAILAKAGITNA-SLTLDVENKP 373
           I   ++     ++Q  L +GLP  L D  +  D A+AK +LA AG      +T+     P
Sbjct: 323 INDVVMPHYGVINQRPLQLGLPARLDDPGYRLDVAEAKRLLAAAGHAEGFKVTIRSLTDP 382

Query: 374 PFITIAQALQASFAEGGVKVELLPAAGSQVYSRVRARQHQAAI-RLWIPDYFDAHSNASA 432
           PFI IA +LQA+ A+ G++  ++   G+Q+Y  +R RQ    + R         HS+  A
Sbjct: 383 PFINIATSLQATLAQAGIQATIITGTGNQIYGAMRDRQFDILVGRGGGGAERHPHSSLRA 442

Query: 433 FAYN-DGKT-STVAGLNGWQI----PQLNQQTLAAVAEADPAKRSALYTAMQQEL-QRSS 485
             YN D +T + ++   GW+     PQLNQ    A  E DP ++  +Y  +Q    Q++ 
Sbjct: 443 LVYNPDNRTEAKLSNFQGWRTSFFDPQLNQLIEQAERERDPERQREIYGQIQTLYDQQAG 502

Query: 486 PYVFIDQAKTEVVLRDNVKGY 506
             + + Q   EVV+  +V+ Y
Sbjct: 503 AIMPVSQMVDEVVIHADVRNY 523