Pairwise Alignments

Query, 522 a.a., ABC transporter substrate-binding protein from Serratia liquefaciens MT49

Subject, 521 a.a., peptide ABC transporter substrate-binding protein from Sinorhizobium meliloti 1021

 Score =  146 bits (368), Expect = 2e-39
 Identities = 141/520 (27%), Positives = 235/520 (45%), Gaps = 47/520 (9%)

Query: 8   LLMLAALSSSALAATPPNTLVVVQSLDDIVSLDPAEANELSSIQTVPSLYQRLVQADRDD 67
           L    A ++ A A TPP+ LVV Q + +  SLDP      +  + + ++Y  LV+  +D 
Sbjct: 14  LAFAGAAAAPAAAQTPPDVLVVGQ-IAEPQSLDPHTVTATNDFRILVNVYDGLVRF-KDG 71

Query: 68  PAKVEPVLAESWQGNAAAKTLTIKLRPQATFASGNPLTADDVIFSFSRAVKMNKSPAFIL 127
             +VEP LAESW+ +   KT T  LR    F  G+   A+ V F+F R +K +  P +  
Sbjct: 72  TLEVEPALAESWKISDDGKTYTFTLRQGVKFHDGSNFDAEAVKFNFDRMLKKDH-PFYDT 130

Query: 128 NV--LGWQPDNIDAQLKKIDDHSLQLSWTANVSPAVALNILSTPIASIVDSKAVQPNAKD 185
               L +   ++ A +  +D+H+++   +   +P   L+ L+ P   IV   AV+ + K+
Sbjct: 131 GPFPLSFNFASVKA-VNVLDEHTVEFKLSEAFAPF--LSNLAYPTGLIVSPVAVEKHGKE 187

Query: 186 GDYGNAWLKMHSAGSGPFKMRVYQPHQAIVLDANPTSPGSKPLLKSIIIKSVPDSATRRL 245
             YG +      +G+GPFK   +  +Q +V++ NP    S   L++++ + + D+ TR  
Sbjct: 188 --YGRS-----PSGTGPFKFVEWLSNQRVVVERNPDYWDSAAKLQAVVFRPITDANTRVA 240

Query: 246 LIQQGDADVARELGPDQTVALKNQPGVKVLEIPSAEQNYLVFNT--GNTANPLLKNPAFW 303
            +  G  DV  E+ PD     +      V E       + + NT  G  A+  ++     
Sbjct: 241 EMMAGGIDVMVEVPPDNLATFEQDANFAVAEQAGPHVWFTILNTKQGPFADKRVR----- 295

Query: 304 EAARYLIDYQGITKDLLKGQYFVHQSFLPVGLPGALKD-NPFSFDPAKAKAILAKAGITN 362
           +AA Y ++ Q +  D+L+G   V    +P           P++ DP KAKA+LA+AG+ N
Sbjct: 296 QAANYAVNKQTLVDDVLRGTATVAAGPIPPAFNWVESSVEPYAHDPEKAKALLAEAGVEN 355

Query: 363 ASLTLDV----ENKPPFITIAQALQASFAEGGVKVELLPAAGSQVYSRV------RARQH 412
             +T  V          IT+  A+QA     G KV++     +    RV      +A   
Sbjct: 356 PQVTFYVTEGGSGMLDPITMGAAIQADLQAVGFKVKIETYEWNTFLGRVNPGLEGKADMA 415

Query: 413 QAAIRLWIPD---YFDAHSNA--SAFAYNDGKTSTVAGLNGWQIPQLNQQTLAAVAEADP 467
           + A     PD   Y    ++A      +N G  S          PQL++    A    D 
Sbjct: 416 EMAWMTNDPDTVPYLTLRTDAMPDKGGFNSGYYSN---------PQLDELLEKARRSTDQ 466

Query: 468 AKRSALYTAMQQELQRSSPYVFIDQAKTEVVLRDNVKGYQ 507
           A+R  LY  +Q  +   +P++F+   K   V    VKG++
Sbjct: 467 AERGKLYGEVQSIVHDDAPWLFVANWKQNAVTTAAVKGFK 506