Pairwise Alignments

Query, 315 a.a., HTH-type transcriptional regulator TreR from Serratia liquefaciens MT49

Subject, 340 a.a., LacI family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

 Score =  110 bits (274), Expect = 6e-29
 Identities = 89/320 (27%), Positives = 142/320 (44%), Gaps = 18/320 (5%)

Query: 7   IKDIARLSGVGKSTVSRVLNNEGSVSPQTRERVEAVIRQQGFTPSKSARAMRGQSDKVVG 66
           IKD+A L+GV +STVSR++N EG    +TR +VE  + Q  + PS  AR++   S  ++G
Sbjct: 4   IKDVAELAGVNRSTVSRIINGEGKFKEETRRKVEQAMAQLNYRPSAIARSLATSSSNMMG 63

Query: 67  IIVSRLDSPSENQAVRTMLPLLYQHGFDPIVMESQFETRLVEEHLHVLQQRNVDGVILFG 126
           ++V+        + +  +   L  H    I  +     +   E +        DG +L  
Sbjct: 64  LLVTYYTGGFFGEMMEQVQTELDMHHKFLITAQGHHSAQGEREAIQRFHDLRCDGYVLHS 123

Query: 127 --FTGLTAAMLSPWQEKMVVLAREYDGFSSVC--YDDDGAVRLLMERLHQQGHRHISYLG 182
              +      L+      V+L R   G    C  +D  GA ++++E L QQGHR I+ + 
Sbjct: 124 RYLSDDDLRALAQQPTPFVLLDRYVAGLEERCITFDHRGASQIVVEYLIQQGHRKIACIT 183

Query: 183 VQLSDATTGLRRHQAYLDACRQRGISPHVAL---GELSYQSGF--QLAASAIEPQTTALV 237
             L    + LR+ Q YLDA  Q GI P  +L   G    +SG+       A  P+ TA+ 
Sbjct: 184 GPLHRHNSRLRQ-QGYLDALAQAGILPSKSLCEEGNYGRKSGYFAMQQLFARHPEITAVF 242

Query: 238 CASDTIALGAIKYLQQQHIT---PLQVCGIGNTPLLNFLFPETFSVDLGYGSAGLQAAQQ 294
             S+ +  GA++YL +Q I     + +    +  L   L+P   +V          A Q 
Sbjct: 243 SCSEEMTTGALQYLHEQGIAVPGRISIVSFDSVDLCESLYPTVTAVHFPISEMARAAVQS 302

Query: 295 LLGQLS-----GEQGLRQII 309
           L+  +      G Q  R I+
Sbjct: 303 LIAMVKQQPTVGPQSFRPIL 322