Pairwise Alignments
Query, 352 a.a., permease from Serratia liquefaciens MT49
Subject, 338 a.a., permease (RefSeq) from Shewanella loihica PV-4
Score = 63.9 bits (154), Expect = 6e-15
Identities = 68/274 (24%), Positives = 115/274 (41%), Gaps = 31/274 (11%)
Query: 99 RDWLMRTLGHPRFSGTLLGAVIALPGMMCTCCAAPVAAGLRRQSVSSGAAMAFWLSNPVL 158
RD+L G P+ G LGA C+C + PV G + G MAF L++P++
Sbjct: 63 RDYLA---GKPKLLGYGLGAGFGAITPFCSCSSIPVFLGFTTAGIPVGITMAFLLTSPLI 119
Query: 159 NPATLIFMGFVLGWQFAAIRLVAGV-IMVLGIAWLVQRATARDPQPAAL----------Q 207
N ++ + +LG + + + G+ I +LG A L R QP A Q
Sbjct: 120 NEVAILLLFSLLGAKITLLYALTGITIGMLGGALLDLLHAERWLQPLAANAYRRGATQTQ 179
Query: 208 TPLLPLDK--ADERPFFGRWLKALWSLFWSTIPVY------ILAVLALGAARVWLFP--H 257
T D DE W + T+ ++ ++ + +GAA P +
Sbjct: 180 TTASASDTYTPDESTPGISWRQRHQFAKQETLTIFGRVWKWVIIGVGIGAALHGFVPAGY 239
Query: 258 ADGAIDNSVLWIIGLAIAGCLFVIPTAAE----IPIVQTLMLAGMGTGPALALLMTLPAV 313
+ + + W + +A+ L IP A IP++++L++ G+ G LA M+ A
Sbjct: 240 LEANLGDGQWWSVPIAV---LMGIPLYANATGVIPVLESLLIQGVPLGTTLAFCMSTVAA 296
Query: 314 SLPSLLMLNKAFSAKALCLTALLVALCGIVTGVV 347
S P +ML + + L L L+ + + G V
Sbjct: 297 SFPEFVMLKQVMQWRLLALLFALLLVAFTLMGWV 330
Score = 48.5 bits (114), Expect = 2e-10
Identities = 34/165 (20%), Positives = 65/165 (39%), Gaps = 7/165 (4%)
Query: 40 YGKAFLAADTHSIGKSILVNDDSSP---WLAAWHYA----LVYFTAVWKAAVLGVVLGSL 92
Y + T + D+S+P W +A L F VWK ++GV +G+
Sbjct: 171 YRRGATQTQTTASASDTYTPDESTPGISWRQRHQFAKQETLTIFGRVWKWVIIGVGIGAA 230
Query: 93 VQVLIPRDWLMRTLGHPRFSGTLLGAVIALPGMMCTCCAAPVAAGLRRQSVSSGAAMAFW 152
+ +P +L LG ++ + ++ +P PV L Q V G +AF
Sbjct: 231 LHGFVPAGYLEANLGDGQWWSVPIAVLMGIPLYANATGVIPVLESLLIQGVPLGTTLAFC 290
Query: 153 LSNPVLNPATLIFMGFVLGWQFAAIRLVAGVIMVLGIAWLVQRAT 197
+S + + + V+ W+ A+ ++ + W++ T
Sbjct: 291 MSTVAASFPEFVMLKQVMQWRLLALLFALLLVAFTLMGWVLNLVT 335