Pairwise Alignments

Query, 352 a.a., permease from Serratia liquefaciens MT49

Subject, 371 a.a., permease, putative (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score = 75.9 bits (185), Expect = 2e-18
 Identities = 64/250 (25%), Positives = 108/250 (43%), Gaps = 31/250 (12%)

Query: 104 RTLGHPRFSGTLLGAVIALPGMMCTCCAAPVAAGLRRQSVSSGAAMAFWLSNPVLNPATL 163
           + LG+P      L A        C+C + P+  G     +  G  MAF +++P++N   +
Sbjct: 108 QALGYP------LAACFGAVTPFCSCSSVPLFIGFSTAGIPLGITMAFLITSPLVNEVAV 161

Query: 164 IFMGFVLGWQ----FAAIRLVAGVIMVLGIAWL-----VQRATARDPQPA-ALQTPLLPL 213
           + +  +LGW+    +  I L+AGV     ++W+     +Q    +  +PA    TP  PL
Sbjct: 162 VLLWGLLGWKLTLVYVGIGLLAGVFGGGCMSWVKAERWLQPFIRQAMRPAGGGLTPFAPL 221

Query: 214 DKA--------DERPFFGRWLKALWSLFWSTIPVYILAVLALGAARVWLFPH--ADGAID 263
             A        D   F      +++S  W     +++  +ALGAA     P    +  + 
Sbjct: 222 PSAVAPKMTWRDRHSFAKNETSSIFSRVWK----WVIGGVALGAALHGYLPQEWVEETLG 277

Query: 264 NSVLWIIGLAIA-GCLFVIPTAAEIPIVQTLMLAGMGTGPALALLMTLPAVSLPSLLMLN 322
               W +  A+A G          IP++++L+L GM  G  LAL M+    SLP  +ML 
Sbjct: 278 KGQWWSVPAAVAVGIPLYANVTGIIPVMESLLLKGMPIGTTLALCMSAVGASLPEFIMLK 337

Query: 323 KAFSAKALCL 332
           +    + L L
Sbjct: 338 QVMQWRLLAL 347



 Score = 45.4 bits (106), Expect = 2e-09
 Identities = 28/112 (25%), Positives = 51/112 (45%), Gaps = 2/112 (1%)

Query: 76  FTAVWKAAVLGVVLGSLVQVLIPRDWLMRTLGHPRFSGTLLGAVIALPGMMCTCCAAPVA 135
           F+ VWK  + GV LG+ +   +P++W+  TLG  ++        + +P         PV 
Sbjct: 246 FSRVWKWVIGGVALGAALHGYLPQEWVEETLGKGQWWSVPAAVAVGIPLYANVTGIIPVM 305

Query: 136 AGLRRQSVSSGAAMAFWLSNPVLNPATLIFMGFVLGWQFAAIRLVAGVIMVL 187
             L  + +  G  +A  +S    +    I +  V+ W+  A  L  G+++VL
Sbjct: 306 ESLLLKGMPIGTTLALCMSAVGASLPEFIMLKQVMQWRLLA--LFGGLLLVL 355