Pairwise Alignments

Query, 384 a.a., ABC transporter permease from Serratia liquefaciens MT49

Subject, 390 a.a., ABC-type multidrug transport system, permease component from Sphingomonas koreensis DSMZ 15582

 Score = 91.3 bits (225), Expect = 4e-23
 Identities = 81/315 (25%), Positives = 137/315 (43%), Gaps = 21/315 (6%)

Query: 33  LSWIFPLILFGLISSNFSEGTLLDLPVSVVDSDHSPLSKSLTRRLDAGSHAHVEAYPGGL 92
           L+W+ PL+L   ++   S G + DLP+ VVD D S +++   RRLDA     V A  G +
Sbjct: 28  LTWV-PLLLLAAVAIQLSAGVMRDLPIIVVDQDGSGIARETARRLDAAPGLRVAALAGDM 86

Query: 93  QESLHRLRSAQDYALLYVPPDFEANALAGKQPSVVMYYNALFYGAGLYSTQDFSGLM--- 149
           +E+   +R+   YA++ +P       + G    V+ ++NA +  A   + ++ +G++   
Sbjct: 87  KEAERLVRARHAYAVVLIPTGTARTVMRGGTARVLAFHNASYSTASGAALREIAGVVQAY 146

Query: 150 -TEINASYRSIIAGEMGKTLPPLADVTLSYGSLFNASGSYIYYQQFAATIHLLQLFVVTC 208
             ++ A   +I+AG      PP+A   +    LFN  GS  Y  Q  A IH   L ++  
Sbjct: 147 AAKLAAEQSAIVAGPGKVRRPPIA---VQSRILFNPQGS--YELQLVALIHPALLHLIFM 201

Query: 209 MIYVLARSKSLLKAR-----------PFSLALLGKLAPYTLCFTSLLMVEIAALVGIFDA 257
           +    A  + L                 ++ + GK+APY L F     +  A L      
Sbjct: 202 VAVAGALGRELRDGTIGAWIGETGKGEAAMRIAGKIAPYFLVFMGWGALATAYLALGRGW 261

Query: 258 RVSGNPLFMLMIGFFYVMAAQSIGLLLFTFTSSTITAYSLIAILVSIALTFSGMAVPELS 317
            V+G+   +L        A   + LL    T S  +A SL  +    +  F+G   P  +
Sbjct: 262 PVTGSVALLLAGYAAMYFAYVGVALLFAGLTLSMGSALSLTGLYAGASFAFAGAIFPIEA 321

Query: 318 MPLPARIISNIEPLT 332
               A++ S + P T
Sbjct: 322 ASAFAQLWSALLPYT 336