Pairwise Alignments

Query, 705 a.a., polyribonucleotide nucleotidyltransferase from Serratia liquefaciens MT49

Subject, 716 a.a., polynucleotide phosphorylase/polyadenylase from Synechococcus elongatus PCC 7942

 Score =  631 bits (1628), Expect = 0.0
 Identities = 352/709 (49%), Positives = 472/709 (66%), Gaps = 13/709 (1%)

Query: 7   RKFQYGQHTVTIETGMMARQATAAVMVSMDDTAVFVTVVGQKKAKPGQSFFPLTVNYQER 66
           +   +    + +E G+ A QA  +V++S  DTAV V    +  A+ G  F PLTV+Y+ER
Sbjct: 6   KSLSFDGRDIRLELGLFAPQAGGSVLISSGDTAVLVAAT-RSTAREGIDFLPLTVDYEER 64

Query: 67  TYAAGRIPGSFFRREGRPSEGETLTSRLIDRPIRPLFPDSFLNEVQVIATVVSVNPQVNP 126
            YAAGRIPG F RREGRP E  TLTSRLIDRP+RPLFP    +++QV+AT +S++  V P
Sbjct: 65  MYAAGRIPGGFLRREGRPPERATLTSRLIDRPLRPLFPSWLRDDLQVVATTLSMDETVPP 124

Query: 127 DIVAMIGASAALSLSGIPFNGPIGAARVGYINSQYVLNPTTDELKESSLDLVVAGTAGAV 186
           D++A+ GAS A  ++ IPF GP+ A RVG +   +++NPT  E+++  LDLVVAGT   V
Sbjct: 125 DVLAVTGASIATLVAKIPFYGPMAAVRVGLVGDDFIINPTYREIEKGDLDLVVAGTPAGV 184

Query: 187 LMVESEADVLSEDQMLGAVVFGHEQQQIVIENINSLVAEAGKPKWDWQAPAVNEALHARV 246
           +MVE+ A+ L E  ++ A+ FG+E  Q +I+   SL+AE G  +   +AP  +  L   V
Sbjct: 185 IMVEAGANQLPEADVIEAIDFGYEAVQELIKAQQSLLAELGIEQILPEAPNADNTLENFV 244

Query: 247 AELAEGRLGDAY-HIT-EKQERYAQVDAIKNSVVETLLAQDE-----TLDASE---IQDI 296
            + A   +     H +  K ER A +D +K SVVE + A  E     ++ A+E   + + 
Sbjct: 245 RDRASSGVQQVLQHFSFTKSERDAALDEVKASVVEAIAALPEEDPVRSVTAAEPKALGNT 304

Query: 297 LGSVEKNVVRSRVLRGEPRIDGREKDMIRGLDVRTGVLP-RTHGSALFTRGETQALVTAT 355
             ++ K ++R ++LR   R+DGR+ D +R +  + G+LP R HGS LF RG TQ L  AT
Sbjct: 305 FKALTKTLMRQQILRDGVRVDGRKLDQVRPISSQVGLLPPRVHGSGLFQRGLTQVLSIAT 364

Query: 356 LGTARDAQNLDELMGEKTDSFLFHYNFPPYSVGETGMVGSPKRREIGHGRLAKRGVLAMM 415
           LGT  DAQ LD+L  +    +L HYN PPYSVGET  + SP RREIGHG LA+R +L ++
Sbjct: 365 LGTPGDAQELDDLHPDTQKRYLHHYNMPPYSVGETRPMRSPGRREIGHGALAERALLPVL 424

Query: 416 PKAEDFPYTVRVVSEITESNGSSSMASVCGASLALMDAGVPIKAAVAGIAMGLVKEQDNF 475
           P  E+FPY +RVVSE+  SNGS+SM SVCG++LALMDAGVPIK  V+G AMGL++E D +
Sbjct: 425 PSKEEFPYVIRVVSEVLSSNGSTSMGSVCGSTLALMDAGVPIKKPVSGAAMGLIREGDEY 484

Query: 476 VVLSDILGDEDHLGDMDFKVAGSRDGITALQMDIKIEGITREIMQVALNQAKGARLHILG 535
            VL+DI G ED LGDMDFKVAG+  GITALQMD+KI G+  EI+  A+NQAK ARLHIL 
Sbjct: 485 RVLTDIQGIEDFLGDMDFKVAGTDQGITALQMDMKIHGLPLEIIADAINQAKPARLHILN 544

Query: 536 VMEQAISTPRGDISQFAPRIHTIRINPDKIKDVIGKGGSVIRALTEETGTTIEIEDDGTV 595
            M +AI+TPR D+S +APR+  I+INP++I  VIG GG  IR++TE+TG  I+IED G V
Sbjct: 545 KMLEAIATPRADLSTYAPRLFRIQINPEQIGLVIGPGGKTIRSITEQTGAKIDIEDTGAV 604

Query: 596 KIAATDGEKAKFAIRRIEEITAEIEVGRIYQGKVTRIVDFGAFVAIGGGKEGLVHISQIA 655
            I+A D + A  A   IE +T  I  G +Y GKVTRI+  GAFV    GKEG++HISQIA
Sbjct: 605 TISAVDADSALRAKSIIEGMTRTITAGDVYIGKVTRIIPIGAFVEFLPGKEGMIHISQIA 664

Query: 656 DKRVEKVTDYLQMGQEVPVKVLEVDRQGRVRLSIKEATAPEAGSPAPEA 704
           D RV +V D L +G EV VKV E+D++GRV L+ ++   PE  S A  A
Sbjct: 665 DYRVARVEDELTVGDEVVVKVREIDQKGRVNLT-RKGIDPEEVSAARAA 712