Pairwise Alignments

Query, 477 a.a., serine-type D-Ala-D-Ala carboxypeptidase from Serratia liquefaciens MT49

Subject, 554 a.a., Serine-type D-Ala-D-Ala carboxypeptidase (RefSeq) from Shewanella amazonensis SB2B

 Score =  215 bits (548), Expect = 3e-60
 Identities = 159/449 (35%), Positives = 231/449 (51%), Gaps = 17/449 (3%)

Query: 18  ANAAPVED-----YTQYLPDGANLALVVQKIGASAPTIDYHSQQMALPASTQKVLTALAA 72
           ++ +P++D     Y    P   N+A++   +      I  +S++  LPAS QK+L ALAA
Sbjct: 96  SSLSPLKDIAPAWYLAIKPKQTNVAVLAVDLKTQQVIISDNSERAMLPASVQKLLLALAA 155

Query: 73  LLQLGPDYRFTTTLESQGDISDGVLRGNLIARFGGDPTFKRQSLRNMVAILKKQGVRQIT 132
              LGPD+RF T L  QG     VL   L   F GDP      L  ++  LK+QGVR I 
Sbjct: 156 QHTLGPDFRFHTQLFVQG-FKPPVLE-RLYIGFSGDPLLTSAELSALLGSLKQQGVRTIN 213

Query: 133 GDVLVDTSVFASHDKAPGWPWNDLTQCFSAPPAAAIVDRNCFSVSLYSAPNPGDMAFIRV 192
              LV  S     DKAPGW W+DL  C+++P A   +D+NC   SL      GD  ++R+
Sbjct: 214 QVYLV--SAVDKSDKAPGWVWDDLGVCYASPVAEFSLDKNCVKASLRPTEK-GDGTYVRL 270

Query: 193 ASYYPVNMFSQVRTLAKGSADAQYCELDVVPGELNRFTLTGCLTQRSDPLPLAFAIQDGA 252
           A    +++ +Q+      S       L VV    NR+ L GC + +   LPL+ A+ D  
Sbjct: 271 AKDAAISIENQLNYRPGASFKECSPHLSVVGP--NRYLLHGCYSGKQ-ALPLSIAVTDTD 327

Query: 253 SYAGAILKDELTQAGIQIDGHLKRQTQPGLKGTVIAQTQSAPLHELLKIMLKKSDNMIAD 312
           ++    +   L  AG       +  T P     +IA  QSA +  LL  MLK+SDN+IAD
Sbjct: 328 AWLQEKVAGLLKAAGFNSHTPKRLHTLPA-NAHLIADHQSATMDSLLSEMLKESDNLIAD 386

Query: 313 TVFRTIGHERFGVPGTWRAGADAVRQVLRQKAGVDLGNSIVVDGSGLSRHNLLAPATMMQ 372
            + + +G  +      +  G+  +   L    GVDL ++ +VDGSGLSR+NLL    +MQ
Sbjct: 387 ALLKQLGKRKGQDESDFYQGSKEMAANLTL-LGVDLSSANLVDGSGLSRYNLLNARQLMQ 445

Query: 373 ALQYIAQHDSELNFISMLPLSGYDGTLRYRGGLHEAGVDGKVSAKTGALQGVYNLAGFIT 432
            L  I   ++  +    LP+SG DGTL Y+ G +   +  +V AKTG++QGV NLAGF+ 
Sbjct: 446 TLLLIHHTEAYASLKDGLPVSGKDGTLLYKRGFNSLPLKDRVQAKTGSMQGVSNLAGFLR 505

Query: 433 TASGQRFAFVQYLSGYAVPPEDQKQRRAP 461
           +   + +AFV   +G  V PE Q  +R P
Sbjct: 506 SGD-REYAFVVLENG-LVEPESQNGKRKP 532