Pairwise Alignments

Query, 477 a.a., serine-type D-Ala-D-Ala carboxypeptidase from Serratia liquefaciens MT49

Subject, 503 a.a., D-alanyl-D-alanine carboxypeptidase, serine-type, PBP4 family from Dechlorosoma suillum PS

 Score =  135 bits (341), Expect = 2e-36
 Identities = 117/422 (27%), Positives = 192/422 (45%), Gaps = 12/422 (2%)

Query: 30  LPDGANLALVVQKIGASAPTIDYHSQQMALPASTQKVLTALAALLQLGPDYRFTTTLESQ 89
           LP G   A+ VQ + A+AP + +++ +   PAS  K++T  AAL +LGP Y + T L   
Sbjct: 56  LPPG-QFAVAVQAVDAAAPRLLHNAARPMNPASVMKLVTTYAALEKLGPAYTWKTELRGD 114

Query: 90  GDISDGVLRGNLIARFGGDPTFKRQSLRNMVAILKKQG-VRQITGDVLVDTSVFASHDKA 148
               DG L GNL     GDP    +    ++  L+ +  VRQI GD++ D   +      
Sbjct: 115 NAPRDGRLEGNLYLVGSGDPALTLERFWLLLRQLRDRAEVRQIGGDLVADRRAYRLPPFD 174

Query: 149 PGWPWNDLTQCFSAPPAAAIVDRNCFSVSLYSAPNPGDMAFIRVASYYPVNMFSQVRTLA 208
           P    N+  + ++    AA+V+      +L      G    +R+    P    +    +A
Sbjct: 175 PAAFDNEPLRAYNVNADAALVNYTALRFTLVPDLAAGS---VRLVQEVPQEGLAVNARIA 231

Query: 209 KGSAD-AQYCELDVVPGEL--NRFTLTGCLTQRSDPLPLAFAIQDGASYAGAILKDELTQ 265
            G+ +   + E   V  +    R  + G         PL  A   G +Y   + +    +
Sbjct: 232 PGAGECGDWREKLTVRFDPTGKRLDIGGSFPLVCGEKPLHLAPLAGDAYLAGLFRPLWRE 291

Query: 266 AGIQIDGHLKRQTQPGLKGTVIAQTQSAPLHELLKIMLKKSDNMIADTVFRTIGHERFGV 325
            G Q  G ++    P + G  + + +S  L E+++   K S N++A  +F  +     G 
Sbjct: 292 LGGQFAGQVREGPAP-VGGVPLLRWESPSLAEIVRDTNKYSSNVMARHLFLALADTPAGE 350

Query: 326 PGTWRAGADAVRQVLRQKAGVDLGNSIVVDGSGLSRHNLLAPATMMQALQYIAQHDSELN 385
             T       +RQVL +K G+      V +GSGLSR + +A  +++Q L    +      
Sbjct: 351 AATLAGARQGLRQVLAEK-GLSFPELAVENGSGLSRDDRIAARSLLQLLLAAWKSPVMPE 409

Query: 386 FISMLPLSGYDGTLRYRGGLHEAGVDGKVSAKTGALQGVYNLAGFITTASGQRFAFVQYL 445
           F++ LPL+G DGTL+ R G       G+   KTG+++GV   AG++T A G+R+A V   
Sbjct: 410 FVASLPLAGRDGTLKRRFG--NGSSAGRAHLKTGSIEGVRAWAGYVTDAGGRRWALVALA 467

Query: 446 SG 447
            G
Sbjct: 468 GG 469