Pairwise Alignments

Query, 477 a.a., serine-type D-Ala-D-Ala carboxypeptidase from Serratia liquefaciens MT49

Subject, 498 a.a., hypothetical protein from Bifidobacterium breve UCC2003

 Score = 50.8 bits (120), Expect = 1e-10
 Identities = 60/223 (26%), Positives = 84/223 (37%), Gaps = 15/223 (6%)

Query: 237 QRSDPLPLAFAIQDGASY----------AGAILKDELTQAGIQIDGHLKRQTQPGLKGTV 286
           Q SD +P      D A Y            A     L Q GI ++        P      
Sbjct: 262 QYSDSMPAPANPDDSAGYPELSQHTAADVAATFSGLLQQHGITVEAEPAAHAAPQ-GANP 320

Query: 287 IAQTQSAPLHELLKIMLKKSDNMIADTVFRTIGHERFGVPGTWRAGADAVRQVLRQKAGV 346
           IA   SA L E+L  ML+ SDN +A+   R     R    G       AVR VL     +
Sbjct: 321 IASVSSATLSEILAFMLRHSDNTLAEEFGRLTALARSENNGP-EGATKAVRTVL-GNLKI 378

Query: 347 DLGNSIVVDGSGLSRHNLLAPATMMQALQYIAQHDSELNFISMLPLSGYDGTLRYRGGLH 406
           D+    + D SGLS  + L   T+    Q              L ++G  G+ R R    
Sbjct: 379 DINGLTMADCSGLSPGSQLTVRTLAAVQQRNLTVGDGAPAAEGLSVAGLVGSARKR--YT 436

Query: 407 EAGVDGKVSAKTGALQGVYNLAGFITTASGQRFAFVQYLSGYA 449
              V G +  KTG+L  V ++AG ++   G   +F   ++  A
Sbjct: 437 SDDVAGLLRVKTGSLDTVTSMAGNVSRTHGGALSFAVVINNPA 479