Pairwise Alignments

Query, 477 a.a., serine-type D-Ala-D-Ala carboxypeptidase from Serratia liquefaciens MT49

Subject, 513 a.a., D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase (RefSeq) from Shewanella sp. ANA-3

 Score =  246 bits (628), Expect = 1e-69
 Identities = 159/430 (36%), Positives = 239/430 (55%), Gaps = 10/430 (2%)

Query: 31  PDGANLALVVQKIGASAPTIDYHSQQMALPASTQKVLTALAALLQLGPDYRFTTTLESQG 90
           P  + +AL+ + +  +       +  + +PASTQKVLTA+ AL  LGPD+R+ T L S  
Sbjct: 57  PRHSQVALLARDLSTNTLLYSQQADTLFIPASTQKVLTAVTALATLGPDFRYVTELWSDA 116

Query: 91  DISDGVLRGNLIARFGGDPTFKRQSLRNMVAILKKQGVRQITGDVLVDTSVFASHDKAPG 150
            I  G + G++  RF GDPT  +  L+ + A L+KQG+  I G + +         +APG
Sbjct: 117 PIRQGHIAGSVYLRFSGDPTLTQDDLKALFAHLQKQGITSIEGHLYLIGDK-QEQLQAPG 175

Query: 151 WPWNDLTQCFSAPPAAAIVDRNC-FSVSLYSAPNPGDMAFIRVASYYPVNMFSQVRTLAK 209
           W W+DL  CF+AP ++ I+++NC +     S+        +R AS + V + S      K
Sbjct: 176 WVWDDLGICFAAPVSSYIINQNCVYGQFAPSSAKHASEVKLR-ASSFGVKVSSDAIFSPK 234

Query: 210 GSADAQYCELDVVPGELNRFTLTGCLTQRSDPLPLAFAIQDGASYAGAILKDELTQAGIQ 269
              D  +C+LD+V    N++ L GC    ++ +PLA AI D   +A   L   L +  + 
Sbjct: 235 AGHD--FCQLDLVRLGQNQYHLRGCYPG-NEAIPLAIAISDPEKFAMDTLTATL-KGEMS 290

Query: 270 IDGHLKRQTQPGLKGTVIAQTQSAPLHELLKIMLKKSDNMIADTVFRTIGHERFGVPGTW 329
           + G +K       K  +IA   SAPL ELLK ML KSDN+IAD++F+ +G   +   G++
Sbjct: 291 LSGKVKIGNAIPSKAKLIASHSSAPLPELLKTMLLKSDNLIADSLFKRVGQSYYKAQGSF 350

Query: 330 RAGADAVRQVLRQKAGVDLGNSIVVDGSGLSRHNLLAPATMMQALQYIAQHDSELNFISM 389
             GA A+R +L +  G+DL N+ +VDGSGLSR+NLL+   +   L  I Q     + I  
Sbjct: 351 THGAAAMRHILTE-LGIDLTNANIVDGSGLSRYNLLSAKQLADVLALIYQDARFHSLIDS 409

Query: 390 LPLSGYDGTLRYRGGLHEAGVDGKVSAKTGALQGVYNLAGFITTASGQRFAFVQYLSGYA 449
           LP +G  GTL+YR G  +  +  +V AKTG++QGV NLAGF+  A  +   FV   +G  
Sbjct: 410 LPEAGVSGTLQYRLGYTKPPLKHRVFAKTGSMQGVANLAGFMRLAQQRDILFVVLENG-- 467

Query: 450 VPPEDQKQRR 459
           + PE +KQR+
Sbjct: 468 ISPETKKQRK 477