Pairwise Alignments

Query, 828 a.a., ribonuclease R from Serratia liquefaciens MT49

Subject, 815 a.a., exoribonuclease R from Klebsiella michiganensis M5al

 Score = 1295 bits (3352), Expect = 0.0
 Identities = 649/827 (78%), Positives = 717/827 (86%), Gaps = 13/827 (1%)

Query: 1   MSQDPFLEREAEKYESPIPSREFILAHLAKRETPASREELAKELNLTGEEPLEALRRRLR 60
           MSQDPFL+RE+EKY +PIPSREFIL HLAKRE PASR+ELA ELN+ GEE  EALRRRLR
Sbjct: 1   MSQDPFLDRESEKYANPIPSREFILDHLAKREKPASRDELATELNIEGEEQQEALRRRLR 60

Query: 61  AMERDGQLIFTRRQCYALPERLDLLRGTVIGHRDGFGFLRIEGSKDDLYLSAEQMKMAIH 120
           AMERDGQL+FTRRQCYALPERLDLL+G VIGHRDG+GFLR+EG KDDLYLS+EQMK  IH
Sbjct: 61  AMERDGQLVFTRRQCYALPERLDLLKGIVIGHRDGYGFLRVEGRKDDLYLSSEQMKTCIH 120

Query: 121 GDVVLAQAMAADRKGRREARIVRVLVPKTSQIVGRFFMDAGTGFVVPDDSRLSFDILIPA 180
           GD VLAQ + ADRKGRREARIVRVLVPKT QIVGR+F DAG GFVVPDDSRLSFDILIP 
Sbjct: 121 GDQVLAQPLGADRKGRREARIVRVLVPKTGQIVGRYFTDAGVGFVVPDDSRLSFDILIPP 180

Query: 181 DAVSGARMGFMVVVELTQRPTRRTKAVGKIVEILGDKMGTSMAVDIALRTHEIPHVWPPQ 240
           + + GARMGF+VVVELTQRPTRRTKA+GKIVE+LGD MGT MAVD+ALRTHEIP+VWPP 
Sbjct: 181 EQIMGARMGFVVVVELTQRPTRRTKAIGKIVEVLGDNMGTGMAVDMALRTHEIPYVWPPA 240

Query: 241 VEKQVADLSEQVPESAKKGRVDLRKLPLVTIDGEDARDFDDAVYCEKKRGGGWRLWVAIA 300
           VEKQVA L EQVPE AKKGRVDLR LPLVTIDGEDARDFDDAVYCEKKRGGGWRLWVAIA
Sbjct: 241 VEKQVAGLKEQVPEEAKKGRVDLRSLPLVTIDGEDARDFDDAVYCEKKRGGGWRLWVAIA 300

Query: 301 DVSYYVRPRTALDDEARNRGTSVYFPSQVIPMLPEVLSNGLCSLNPQVDRLCMVCEMTIS 360
           DVSYYVRP T LD EAR+RGTSVYFPSQV+PMLPEVLSNGLCSLNPQVDRLCMVCEMTIS
Sbjct: 301 DVSYYVRPGTPLDGEARSRGTSVYFPSQVVPMLPEVLSNGLCSLNPQVDRLCMVCEMTIS 360

Query: 361 AQGRLSTAKFYEAVMSSHARLTYNKVWHILQGDQELREHYHPLVKHLEELHAMYKVLDQA 420
           A+GRL+  KFYEAVMSSHARLTY KVWH+LQGDQ+LRE Y PLVKH+EELH +YKVLD A
Sbjct: 361 AKGRLTGFKFYEAVMSSHARLTYTKVWHMLQGDQDLREQYAPLVKHIEELHNLYKVLDGA 420

Query: 421 RAERGGIAFETEEAKFIFNAERRIERVEPTVRNDAHKLIEECMIMANVAAARFVEKNNEP 480
           R ERGGI+FE+EEAKFIFNAERRIER+E T RNDAHKLIEECMI+AN++AARFVEK  EP
Sbjct: 421 REERGGISFESEEAKFIFNAERRIERIEQTQRNDAHKLIEECMILANISAARFVEKAEEP 480

Query: 481 ALFRVHDRPSDDHISALRSVLGELGLTLGGGNKPQPKDYATLMDEVSERPDHEMLQTMLL 540
           ALFR+HD+PS + I+A RSVL ELGL L GGNKP+P+DYA L+  +++RPD EMLQTMLL
Sbjct: 481 ALFRIHDKPSTEAITAFRSVLAELGLELPGGNKPEPRDYAELLTSIADRPDAEMLQTMLL 540

Query: 541 RSMKQAVYDPENRGHFGLALASYGHFTSPIRRYPDLAMHRAIKYQLAKEHGEPKERWTPT 600
           RSMKQA+YDPENRGHFGLAL SY HFTSPIRRYPDL++HRAIKY LAKE G  K   T T
Sbjct: 541 RSMKQAIYDPENRGHFGLALQSYAHFTSPIRRYPDLSLHRAIKYLLAKEQGH-KGNSTET 599

Query: 601 GGWHSEFEEMLQLGEHCSMAERRADEATRNVADWLKCDFMQDHVGEVFSGIIASVTGFGF 660
           GGWH   +EMLQLG HCSM ERRADEATR+V+DWLKCDFM D VG VF G+IASVTGFGF
Sbjct: 600 GGWHYSMDEMLQLGAHCSMTERRADEATRDVSDWLKCDFMLDQVGNVFKGVIASVTGFGF 659

Query: 661 FVRLNDLFIDGLVHVSSLDNDYYRYDNIGQRLIGESSGVVYRLGDTVEIRVEAVHMDERK 720
           FVRL++LFIDGLVHVSSLDNDYYR+D +GQRLIGES G  YRLGD VE+RVEAV+MDERK
Sbjct: 660 FVRLDELFIDGLVHVSSLDNDYYRFDQVGQRLIGESGGQTYRLGDRVEVRVEAVNMDERK 719

Query: 721 IDFALVSSTRKPRGEGKTERDRAKKGGQRTLRDGAGAGRTSSPRKRRGGKPPANFEPDSA 780
           IDF+L+SS R PR  GKTER++AKK          GAG  SS R+R+ GK   NFEPDSA
Sbjct: 720 IDFSLISSERAPRNVGKTEREKAKK----------GAGGKSSGRRRQAGK-QVNFEPDSA 768

Query: 781 FRKDEAKPADKVKKDK-KAKAKKVSDKTRKIAAATKAKRAGKKKGAE 826
           FRK + +   K  + K + KAKK S+KT+KIAAATKAKRA KKK AE
Sbjct: 769 FRKQKGQSQPKSAQPKGEKKAKKPSEKTQKIAAATKAKRAAKKKIAE 815