Pairwise Alignments

Query, 548 a.a., chaperonin GroEL from Serratia liquefaciens MT49

Subject, 549 a.a., chaperonin GroEL (RefSeq) from Shewanella loihica PV-4

 Score =  870 bits (2247), Expect = 0.0
 Identities = 457/549 (83%), Positives = 498/549 (90%), Gaps = 2/549 (0%)

Query: 1   MAAKDVKFGNDARVKMLRGVNVLADAVKVTLGPKGRNVVLDKSFGAPTITKDGVSVAREI 60
           MAAK+V FGNDARVKML GVNVLA+AVKVTLGPKGRNVVLDKSFGAP ITKDGVSVA+EI
Sbjct: 1   MAAKEVLFGNDARVKMLAGVNVLANAVKVTLGPKGRNVVLDKSFGAPLITKDGVSVAKEI 60

Query: 61  ELEDKFENMGAQMVKEVASKANDAAGDGTTTATVLAQSIITEGLKAVAAGMNPMDLKRGI 120
           ELEDKFENMGAQMVKEVASKANDAAGDGTTTATVLAQ+I+TEGLKAVAAGMNPMDLKRGI
Sbjct: 61  ELEDKFENMGAQMVKEVASKANDAAGDGTTTATVLAQAIVTEGLKAVAAGMNPMDLKRGI 120

Query: 121 DKAVIAAVEELKKLSVPCSDSKAIAQVGTISANSDETVGKLIAEAMEKVGKEGVITVEEG 180
           DKAV+AAV ELK LS  CSD+KAIAQVGTISANSDE++G++IA AMEKVGKEGVITVEEG
Sbjct: 121 DKAVVAAVAELKTLSQECSDTKAIAQVGTISANSDESIGEIIATAMEKVGKEGVITVEEG 180

Query: 181 TGLQDELDVVEGMQFDRGYLSPYFINKPETGSIELESPFILLADKKISNIREMLPVLEAV 240
             L++ELDVVEGMQFDRGYLSPYFINKPETGS+ELE+P+ILL DKKISNIRE+LP+LE +
Sbjct: 181 QALENELDVVEGMQFDRGYLSPYFINKPETGSVELENPYILLVDKKISNIRELLPILEGL 240

Query: 241 AKAGKPLLIIAEDVEGEALATLVVNTMRGIVKVAAVKAPGFGDRRKAMLQDIATLTAGTV 300
           AK GKPL+IIAEDVEGEALATLVVN MRGIVKVAAVKAPGFGDRRKAMLQDIA LT GTV
Sbjct: 241 AKTGKPLMIIAEDVEGEALATLVVNNMRGIVKVAAVKAPGFGDRRKAMLQDIAILTGGTV 300

Query: 301 ISEEIGLELEKATLEDLGQAKRVVINKDTTIIIDGVGDEATIQGRVTQIRQQIEEATSDY 360
           I+EEIGLELEKATLEDLG AKRVVI KD T IIDG G++  I  RV QI+ Q EE+TSDY
Sbjct: 301 IAEEIGLELEKATLEDLGTAKRVVITKDDTTIIDGTGEQEQISARVAQIKIQAEESTSDY 360

Query: 361 DREKLQERVAKLAGGVAVIKVGAATEVEMKEKKARVEDALHATRAAVEEGVVAGGGVALI 420
           DREKLQER+AKLAGGVAVIKVGAATEVEMKEKKARVEDALHATRAAVEEGVVAGGGVALI
Sbjct: 361 DREKLQERMAKLAGGVAVIKVGAATEVEMKEKKARVEDALHATRAAVEEGVVAGGGVALI 420

Query: 421 RVASKIANLKGDNEDQNVGIKVALRAMESPLRQIVINAGEEASVIANNVKAGEGSYGYNA 480
           RVASKI  L   NEDQ  G+ +ALRAME+PLRQI  NAGEEASV+ANNVK G G+YGYNA
Sbjct: 421 RVASKIGELDVANEDQKHGVTIALRAMEAPLRQIATNAGEEASVVANNVKNGSGNYGYNA 480

Query: 481 YTEEYGDMIAMGILDPTKVTRSALQYAASVAGLMITTECMVTDLP-KSDAPDLGG-AGGM 538
            ++ YGDM+ MGILDPTKVTRSALQ+A+S+AGLMITTE MV D+P ++ A D+GG  GGM
Sbjct: 481 GSDVYGDMLEMGILDPTKVTRSALQFASSIAGLMITTEAMVGDVPQEAGAGDMGGMGGGM 540

Query: 539 GGMGGMGGM 547
           GGMGGMG M
Sbjct: 541 GGMGGMGMM 549