Pairwise Alignments

Query, 844 a.a., trimethylamine-N-oxide reductase TorA from Serratia liquefaciens MT49

Subject, 820 a.a., anaerobic dimethyl sulfoxide reductase, A subunit, DmsA/YnfE family (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  281 bits (720), Expect = 8e-80
 Identities = 246/859 (28%), Positives = 383/859 (44%), Gaps = 113/859 (13%)

Query: 9   LSRRRFL---AQLGGLTAI--GMIGPSLLVPKNALAQGGLQEGILTGSHWGA-------I 56
           L RR FL   A LGG   +  G+ G   L P  A A GG +      S           +
Sbjct: 15  LDRRTFLKWCALLGGAAMLPGGLAG---LCPAVAEAAGGGEPQDFVWSSCNVNCGSRCVL 71

Query: 57  RATVVDGRFVAAKPFEM--DKYPSKMIAG------LPDHVHGTARIRYPMVRIDWMRKRH 108
           RA V DG  V      +  D Y +  I        +   V+   R++YPM+R        
Sbjct: 72  RAMVRDGAIVRMDTDNLGSDDYGTHQIRACLRGRAMRQRVYAPERLKYPMLR-------- 123

Query: 109 LSDTTQRGDNRFVRVSWDEALNLFYQELERVQNTYGPSALLSGTGWQSTGMFHNAAGM-- 166
              T +RG+  F R +WDEAL++   +++ ++  YG  A     G  + G   + +    
Sbjct: 124 ---TGKRGEAAFRRATWDEALDVIAAKMKDIKERYGNEAFYLNYGTGNLGSVMSKSWPTD 180

Query: 167 ---LARALALHGDSVGTGGDYSTGAAQVILPRVVGSMEVYEQQTSWPLVLQNSKTLVLWG 223
              + R +  +G  +     YST      +P + G              + NSK +VL+G
Sbjct: 181 QTPITRLMNCYGGYLNHYNTYSTAQIATSMPYLYGGGLGNALSD-----IVNSKLVVLFG 235

Query: 224 SDLVKNQQANWWCPDHDVYEYYAELKAKVAKGEINVVSIDPVVSSTHAFLGREHVQHIAL 283
           ++  + + +        VY+    ++    +  + V+ IDP  + T   +  E    I +
Sbjct: 236 NNPAETRMSGGGV----VYD----IQRAKRESNVRVIVIDPRYTDTAVAVADEW---IPI 284

Query: 284 NPQTDVPLQLALAHTLYSENLHDTHFLKTYCVGFEQ------------FLPYLLGQ-TDG 330
            P TD  L   +A+ L++E + D  F+ TYCVG ++            +  Y+ G+  DG
Sbjct: 285 RPATDAALAAGIAYVLFTEGMADRSFMDTYCVGHDEAHLPEGVPAGSSYEAYITGKGPDG 344

Query: 331 QPKDAQWASALCGIDAEIIRALARQMAANRTQIIA-GWCVQRMQHGEQWAWMTVVLAAML 389
             K   WASA+CG+  + I  LAR++   +   I+ GW  QR  +GE       VLAA+ 
Sbjct: 345 VAKTPGWASAICGVPVDTIVRLAREIGTAKPCCISQGWGPQRHHNGETNCRAIAVLAALT 404

Query: 390 GQIGLPGGGFGF---GWHYNGAGTPSRKGVILSGFSGSTATPARHAKGDFKGYSSTIPIA 446
           G +G+ GG  G    G+     G P+ K  + +  S    T A     +       +   
Sbjct: 405 GNVGISGGNTGAREGGYSIPFPGFPTLKNPVAASISFFLWTDAIVRGPEMTAERDGV--- 461

Query: 447 RFIDAMLEPGKEIDWNGKRVKLPMLKMCVFAGTNPFHRHQQVNR---MIAGWQKLETVIS 503
           R +  +  P K I WN             +AG    ++H  +NR   +++   K E ++ 
Sbjct: 462 RGVPRLNVPVKFI-WN-------------YAGNALINQHSDINRTAQILSDDTKCEMIVV 507

Query: 504 IDNQWTSTCRFADIVLPATTQFERNDLDQFGNHSNRGIIAMKQ-LVPPQFEARNDFDILR 562
           ++N  T + RFAD++LPA T  E ND    G+ +  G +   Q  + P FE+R+ +D+  
Sbjct: 508 VENFMTPSARFADVLLPAVTNLEENDFAHQGSTAEMGYVVFAQKAIEPLFESRSVYDMCA 567

Query: 563 ELCKLFDRERDFTEGLDEMGWIKRIYQDGARQGKGRGVTLPAFDEFWDGDGYVEFHHPEM 622
           ++ +       +TEG     W+++I  D  ++      TL   +E W    Y   +  + 
Sbjct: 568 DIAERLGVREQYTEGRTRDQWLQKILTDARQKLPDLPATL---EEAWKLGVYKVRNPGKP 624

Query: 623 FVRHQAFRQDPDLEPLGTPSGLIEIYSKSIADMNYK-------NCKGYPMWFEKAERSHG 675
           FV ++AFR DP   PL TPSG IEI+SK + D+ +K            P + E AE   G
Sbjct: 625 FVAYKAFRDDPVANPLATPSGRIEIFSKRLWDIGHKWELPAGERITALPEYDEAAE-GQG 683

Query: 676 GPLSASYPLHLQSVHPDFRLHSQLCESETLRAQYSVAGKEPVFISPEDADARGINNGDVV 735
            PL   YPL L + H   R HS       L+     A  + V+++P DA  RG+ +GD+V
Sbjct: 684 DPLRKKYPLQLVTHHYKQRTHSTYGNVPWLKE----AAPQTVWVNPLDAADRGLAHGDMV 739

Query: 736 RVFNARGQVLAGAVVSDRYAPGVIRIHEGAWYDPERGGVAGSLCKYGNPNVLTLDIGSSE 795
           RVFN RG  +    V+ R  PG+I I +GAWY P  GG        G+ N+LT  +  S 
Sbjct: 740 RVFNDRGATVLPVKVTPRIMPGIISIPQGAWYTPGAGGTDFG----GSANILT-SLRPSP 794

Query: 796 LAQATSAHTALVEIERFNG 814
           LA+    HT LVE+ R +G
Sbjct: 795 LAKGNPQHTTLVEMARHSG 813