Pairwise Alignments

Query, 162 a.a., transcription/translation regulatory transformer protein RfaH from Serratia liquefaciens MT49

Subject, 167 a.a., antitermination protein NusG from Pedobacter sp. GW460-11-11-14-LB5

 Score = 51.6 bits (122), Expect = 6e-12
 Identities = 39/144 (27%), Positives = 64/144 (44%), Gaps = 7/144 (4%)

Query: 4   WYLLYCKRGQLLRAQDHLERQEVNCLSPIITLEKIVRGKRIAVSEPLFPNYLFVKFDPER 63
           WY +Y +     +A + L R+ +    P+    K    ++  V EPL  +YLF       
Sbjct: 8   WYPVYTRSRAEKKANEELNRKGIQTYLPLKKAVKQWSDRKKIVEEPLIKSYLFAYISARE 67

Query: 64  IHTTTISATRGVSHFVRFGSTPTTIPQKVIEELQ----THTGETYVDPETPQPGDSVLIV 119
                +  T GV+ F+ F S   +IP + I +L+    T      +D +  +PG+ VLI 
Sbjct: 68  Y--AEVLMTNGVARFIYFSSQIASIPDQQIHDLKLLLATDADLELIDYDI-KPGERVLIK 124

Query: 120 DGVFEGLKAIYTEPDGEARSMLLL 143
            G F+G+ A       + R +L L
Sbjct: 125 AGPFKGVIAELVSVHNKQRIILRL 148