Pairwise Alignments

Query, 295 a.a., sn-glycerol-3-phosphate ABC transporter permease UgpA from Serratia liquefaciens MT49

Subject, 294 a.a., glycerol-3-phosphate transporter permease from Herbaspirillum seropedicae SmR1

 Score =  352 bits (903), Expect = e-102
 Identities = 171/290 (58%), Positives = 218/290 (75%)

Query: 5   RPGFGCSWLPYVLVLPQLLITAIFFLWPAGEALWYSVQSLDPFGLSSQFVGLDNFTQLFH 64
           R  F   WLPY+LV PQ++IT +FF WPA +AL+ S+   D FG  S+FV  DNF  LF 
Sbjct: 4   RARFTSKWLPYLLVAPQIIITLLFFFWPAVQALYQSMLLQDAFGGYSEFVWFDNFKTLFG 63

Query: 65  DPYYLDSFYTTLIFSFLVAGIGLVVSLFFAALVDYVLRGSRIYQTLMILPYAVAPAVAAV 124
           DP YL+SF TT IFS LVA  GL +SL  A   D V RG+ IY+T +I PYAV+P V  V
Sbjct: 64  DPTYLESFRTTAIFSALVAFFGLALSLLLAVFADRVRRGASIYKTFLIWPYAVSPVVVGV 123

Query: 125 LWIFLFNPGLGLITHFLNGLGYSWNHAQNSGQAMFLVVLASVWQQISYNFLFFLAALQSI 184
           LW+FL +P LG+++H L+ LG  W++  N   AM L+V+A++W+QISYNFLFFLA LQSI
Sbjct: 124 LWMFLLSPSLGILSHVLSWLGLPWDYMINGTHAMILIVIAAIWKQISYNFLFFLAGLQSI 183

Query: 185 PRSLVEAAAIDGAGPVRRFFNLVLPLITPVSFFLLVVNLVYAFFDTFPVIDAATGGGPVQ 244
           P+SL+EAAAIDGAGPV+RFF +V PLI+P +FFL VVN+VYAFFDTF ++DA T GGP +
Sbjct: 184 PKSLIEAAAIDGAGPVKRFFTIVFPLISPTTFFLFVVNVVYAFFDTFVIVDATTHGGPGK 243

Query: 245 STTTLIYKIYREGFAGLDLSSSAAQSVILMLLVIGLTVIQFRFVERKVRY 294
            T  L+YK++ +GF G DL  SAAQSV+LM LVI LTV+QF++VE+KV+Y
Sbjct: 244 DTEILVYKVFSDGFKGGDLGGSAAQSVVLMALVILLTVVQFKYVEKKVQY 293