Pairwise Alignments

Query, 464 a.a., carbohydrate porin from Serratia liquefaciens MT49

Subject, 442 a.a., porin from Pseudomonas fluorescens FW300-N2C3

 Score =  231 bits (590), Expect = 3e-65
 Identities = 139/421 (33%), Positives = 209/421 (49%), Gaps = 21/421 (4%)

Query: 46  FEPPQPGLLGDMLGIRPILEDHGFHYNLGYLSQLSYNAGGGYNHDRQASYIDQFSLTFSQ 105
           F P  P +LGD  G+R  L + G+ +N+ Y    + N  GGY+    A Y DQ +L  + 
Sbjct: 31  FSPESPWMLGDWGGLRTELLEKGYTFNVLYTGDAATNLAGGYDSHTTARYTDQLALMSNF 90

Query: 106 DLQALTGIPDAALEGNIVNRNHDNNLTRDRLQDPRVNPTDLSQESYGGQSITRLGWLTFS 165
           DL+ + G  DA  +  I +RN   NLT D L DPRV      QE YG     RL  L + 
Sbjct: 91  DLEKILGWEDADFQFTISDRN-GRNLTNDVLTDPRVGGISQVQEVYGRGQTWRLTQLWYR 149

Query: 166 RSFLERRLQWRIGMMNKVQDFDQIIPCDFQTLTLCGGKSANSLTW-----YNWNVHYWGT 220
           + F +  L  ++G MN  +DF    PC FQ L  CG +  N   W     YNW +  W  
Sbjct: 150 QKFFDGGLDIKLGRMNFGEDFGSF-PCKFQNLAFCGAQPGN---WAGDIIYNWPITQWAG 205

Query: 221 TLQYKLTDGLTFKTGLMEQNPSAPSRSHAWSWSTKGSKGLLLPMELELKTH-AVNQLPGV 279
            ++  L+D    + G  EQNPS     + +  S  G++G L+P+EL   T     +LPG 
Sbjct: 206 RVKVALSDNTYAQIGAYEQNPSYLEIGNGFKLSGSGNEGTLVPVELVHTTSLGAGRLPGE 265

Query: 280 YNLGVLFTNARQQDLYEGVSGGPGASDPNGY-RSHDRTWFLYSGFNQQLTRHPDDANRGL 338
           Y +G  +++    D+          ++ NG  +S D     +    QQ+ + PD A RGL
Sbjct: 266 YRVGAYYSSRDANDVN---------TEENGIAKSRDSKHGAWIAGQQQVWKDPDFAARGL 316

Query: 339 SLFYSLGLADPRSNYMHYSTSTGIRYRGLFDARPDDWLGLGVSMVKLSDHYRDNQRYLNQ 398
           ++F    + D  +N +      G  Y   F +RP+D +G+ ++ + +++ + D Q+ LN 
Sbjct: 317 TVFAYATVHDKATNMIDRYAQVGAYYTAPFKSRPNDEIGVAIASLHVNNRFTDRQQQLND 376

Query: 399 LNNATAYNDPNFRPVPGHSVTAELYYRFNVTPWLQLQPGLQYWHHPGGVSETQDVWVTAL 458
               + Y+DP + P        E+YY F VT WL ++P LQ+  +PGGVSE +D WV  L
Sbjct: 377 RAGVSDYDDPRYTPTQSSETNMEIYYGFGVTKWLTVRPNLQFVGNPGGVSEVRDAWVAGL 436

Query: 459 K 459
           K
Sbjct: 437 K 437