Pairwise Alignments

Query, 464 a.a., carbohydrate porin from Serratia liquefaciens MT49

Subject, 451 a.a., carbohydrate porin from Ralstonia sp. UNC404CL21Col

 Score =  177 bits (449), Expect = 6e-49
 Identities = 126/422 (29%), Positives = 191/422 (45%), Gaps = 27/422 (6%)

Query: 51  PGLLGDMLGIRPILEDHGFHYNLGYLSQLSYNAGGGYNHDRQASYIDQFSLTFSQDLQAL 110
           P L GD  G+R  L + G  +NLGY S++++N  GG  H     Y DQ+ +  + DLQ L
Sbjct: 49  PYLTGDWGGLRTRLAEQGVTFNLGYGSEVAHNFSGGTEH--LTRYTDQWVIGTALDLQKL 106

Query: 111 TGIPDAALEGNIVNRNHDNNLTRDRLQDPRVNPTDLSQESYGGQSITRLGWLTFSRSFLE 170
            G   A  +  + +RN      R+   D  +    L QE YG      L     ++  L 
Sbjct: 107 VGWQGATFQATVTDRNG-----RNLGSDANIGNNMLIQEVYGRGQTWHLTQFWLNQKLLN 161

Query: 171 RRLQWRIGMMNKVQDFDQIIPCDFQTLTLCGGKSANSLT--WYNWNVHYWGTTLQYKLTD 228
            RL+ + G +   +DF     CDFQ LT CG +  N +   W NW    WG   +   + 
Sbjct: 162 DRLEIKAGRVTVGEDFFSF-SCDFQNLTFCGSQPGNLVGGYWVNWPTSQWGARAKVHTSA 220

Query: 229 GLTFKTGLMEQNPSAP----SRSHAWSWSTKG-SKGLLLPMELELKTHAVNQLPGVYNLG 283
               + G+ + NP+      +R + W  +  G + G L+P+E       +   PG Y  G
Sbjct: 221 ETYAQIGVYQVNPNYVDDGWARRNGWKLNNPGGTTGALIPLEFGWMP-TIEGRPGTYRAG 279

Query: 284 VLFTNARQQDLYEGVSGGPGASDPNGYRSHDRTWFLYSGFNQQLTRHPDDANRGLSLFYS 343
           V +  +  +DLYE V+G          +  +  + +Y    QQ+T  PD   RG ++F +
Sbjct: 280 VWYNTSNGKDLYEDVNGNARGITGLDAKQRNGQYGVYLNLQQQITGAPD--GRGATVFLN 337

Query: 344 LGLADPRSNYMHYSTSTGIRYRGLFDARPDDWLGLGVSMVKLSDHYRDNQRYLNQLNNA- 402
              AD  +    +  S G++Y+G FD R  D +G  V     +  Y D  R  N    A 
Sbjct: 338 FSQADRNTAQTDHQISVGVQYKGPFD-RLSDTVGFAVGATHNNGRYADFVRQTNARTGAN 396

Query: 403 TAYNDPNFRPVPGHSVTAELYYRFNVTPWLQLQPGLQYWHHPGGVSETQDVWVTALKTVV 462
           T   D       G+   +ELYY ++    +  +P LQY  HPGG S+ ++ +V  LKT V
Sbjct: 397 TVVGD-------GYEYVSELYYSWSPVKSVYFRPNLQYILHPGGTSQNKNAFVVGLKTGV 449

Query: 463 TF 464
           TF
Sbjct: 450 TF 451