Pairwise Alignments

Query, 464 a.a., carbohydrate porin from Serratia liquefaciens MT49

Subject, 507 a.a., carbohydrate porin from Burkholderia phytofirmans PsJN

 Score = 90.1 bits (222), Expect = 2e-22
 Identities = 112/472 (23%), Positives = 188/472 (39%), Gaps = 53/472 (11%)

Query: 11  CAGLLWVSVGAQAETLQTAKDV--EAPTAQWQGVAL------GFEPPQPGLLGDMLGIRP 62
           C    W S+ A     +   D   EAP A  +  A       GF   Q  +LGD+ G+RP
Sbjct: 40  CTAFAWASLTAGVAMAEANPDAAPEAPEADLKIQATQANQWTGFWNRQQ-MLGDIGGLRP 98

Query: 63  ILEDHGFHYNLGYLSQLSYNAGGGYNHDRQASYIDQFSLTFSQDLQALTGIPDAALEGNI 122
            L  +G  + L   S++  N  GG    + A Y    + T   D Q   G+P      + 
Sbjct: 99  WLGKYGVTFTLTETSEVLANLRGGL--AKGADYDGLTTATVQLDTQKAFGLPGGLFNVSA 156

Query: 123 VNRNHDNNLTRDRLQDPRVNPTDLSQESYGGQSITRLGWLTFSRSFLERRLQWRIGMMNK 182
           + + H  NL+ ++L       T  +         TRL  L + +SFL +R+  +IG  + 
Sbjct: 157 L-QIHGANLSANKL------GTLNTASGIEADDTTRLWELWYQQSFLNKRIDVKIGQQSI 209

Query: 183 VQDFDQIIPCDFQTL---TLCGGKSANSLTWYNWNVHY----WGTTLQYKLTDGLTFKTG 235
            Q+F   I   +  L   T+ G  +  S    +    Y     G  ++ ++T  LT   G
Sbjct: 210 DQEF---ITSQYSALFVNTMFGWPALPSYDMPSGGPAYPLSDLGVRVRGQITPSLTALAG 266

Query: 236 LMEQNPSAPSRSHAWSWSTKGSKGLLLPMELELKTHAVNQ-------------LPGVYNL 282
           + + +P   + ++    +     G L   EL+   +A+NQ             LPG Y L
Sbjct: 267 VYDGDPLGNNPNNKSGTNFNLHNGTLFIGELQ---YAINQPADGEMVGAGGGGLPGTYKL 323

Query: 283 GVLFTNARQQDLYEGVSGGPGASDPNG--YRSHDRTWFLYSGFNQQLTRHPDDANRGLSL 340
           GV + N    D     +G   A+       ++H   + +Y+  +Q + R   D  R + +
Sbjct: 324 GVWYNNGSFADQRYDNTGLSLANPATSGVAQNHRGDYSIYAVADQMIWRPDPDEPRSIGV 383

Query: 341 FYSLGLADPRSNYMHYSTSTGIRYRGLFDARPDDWLGLGVSMVKLSDHYRDNQRYLNQLN 400
           F  +  A    N +  + + G+  +  F  R +D +GL ++ +K+ +H       +N L+
Sbjct: 384 FARVMGAPGDRNLVSLAANVGVVMKAPFQGRDNDSVGLALTYIKVGNH-------VNGLD 436

Query: 401 NATAYNDPNFRPVPGHSVTAELYYRFNVTPWLQLQPGLQYWHHPGGVSETQD 452
             T         V       E  Y++ V PW Q+Q   QY  + G      D
Sbjct: 437 ADTRAFTNGPYGVRTSETALEATYQYQVNPWWQVQADAQYTFNAGAGQNPND 488