Pairwise Alignments

Query, 647 a.a., '2',3'-cyclic-nucleotide 2'-phosphodiesterase (EC 3.1.4.16)' transl_table=11 from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

Subject, 652 a.a., 2',3'-cyclic-nucleotide 2'-phosphodiesterase CpdB from Phaeobacter inhibens DSM 17395

 Score =  553 bits (1425), Expect = e-162
 Identities = 305/653 (46%), Positives = 409/653 (62%), Gaps = 26/653 (3%)

Query: 5   SATLLATLIAASVNAAT--VDLRIMETTDLHSNMMDFDYYKDTATEKFGLVRTASLIHAA 62
           SA L+A L   SV AA+  V LR+METTDLH ++  +DYY D   +  GL RTASLI   
Sbjct: 14  SAGLIA-LHPFSVQAASNQVHLRLMETTDLHVHVFPYDYYADKPRDTVGLARTASLIGDI 72

Query: 63  RNEVKNSVLVDNGDLIQGSPLGDYMA-AKGLKDGDVHPVYKALNTLDYAVGNLGNHEFNY 121
           R E  NS+L+DNGD +QG+P+GDY+A  +G+K+GD HPV +A+N + +    LGNHEFNY
Sbjct: 73  RAEATNSLLLDNGDFLQGNPMGDYIAYERGMKEGDTHPVIQAMNAVGFDGSTLGNHEFNY 132

Query: 122 GLDYLHNALAGAKFPYVNANIIDVKTQKP-----LFTPYLIKETSVIDKDGNPQTLKIGY 176
           GLD+L  +LAGA FP V AN+       P     L  PY+I E  + D  GN   +KIG 
Sbjct: 133 GLDFLMKSLAGADFPVVCANVAKSTGAGPRDDTTLLPPYVILERELTDGAGNTHPIKIGL 192

Query: 177 IGFVPPQIMIWDKANLSGKVTVNDITETARKYVPEMREKGADIVVVIAHSGLSADPYHSM 236
           IGFVPPQ+M WD+ +L G V   DI ETAR YVPEM+EKGADI++ ++HSG+ +      
Sbjct: 193 IGFVPPQVMNWDRRHLEGNVQARDILETARAYVPEMKEKGADIIIALSHSGIGSAQEVDG 252

Query: 237 AENSVYYLSEVPGVDAIMFGHAHAVFPGKDFADIKGADIAKGTLNGIPAVMPGMWGDHLG 296
            EN+   L+ V G+DAIM GH+H VFP   +AD  G D+ KGT++G PA M G WG H+G
Sbjct: 253 MENASVPLAAVEGIDAIMTGHSHLVFPSSTYADFAGVDVDKGTIHGTPATMGGFWGSHMG 312

Query: 297 VVDLVLNNDSGKWQVTQAKAEARPIYDAAAKKSLAAEDSKLVGILKA---DHDATREFVS 353
           ++DL+L  D   W+V    +EARPI      +S+ A       +L A   +HD T ++V 
Sbjct: 313 LIDLMLERDGSGWRVVGHASEARPISQREEDRSITALVESAPAVLAAAQKEHDETLQYVR 372

Query: 354 KPIGKSADNMYSYLALVQDDPTVQVVNNAQKAYVEHFIQGDPDLAKLPVLSAAAPFKVGG 413
           + +GK+   ++SY ALV DDP+VQ+V+ AQ  Y+E  ++G  +   LP+LSAAAPFK GG
Sbjct: 373 RAVGKTDAPLHSYFALVADDPSVQIVSIAQTWYIEQMLKG-TEHEGLPILSAAAPFKAGG 431

Query: 414 RKNDPASFVEVEKGQLTFRNAADLYLYPNTLVVVKASGKEVKEWLECSAGQFNQIDIHSN 473
           R      + +V KG +  +N ADLYLYPNT   V+ +G +VK+WLE SAG FNQI     
Sbjct: 432 R-GGAEYYTDVPKGDVAIKNVADLYLYPNTARAVRVTGAQVKDWLERSAGMFNQI-TPGA 489

Query: 474 KPQSLINWDGFRTYNFDVIDGVNYQIDVSQPARYDGECQMVNPQAERIKNLTFNGKPVDP 533
             Q L+N   F +YNFDVIDGV YQID+SQP+++  +  + NP A RI NL F+G P+DP
Sbjct: 490 ADQVLLN-PAFPSYNFDVIDGVTYQIDLSQPSKFGPKGALENPDANRIVNLEFDGAPIDP 548

Query: 534 NATFLVATNNYRA-YGGKFAGTGDSHIAFASPDENRAVLAAWIGAESKRAGEIHPAADNN 592
              F++ATNNYRA  GG F G     + F  PD NR V+  +I       G I P AD N
Sbjct: 549 AQEFIIATNNYRAGGGGAFPGAMGDTVVFEGPDTNRDVIVRYI----VEKGTISPRADAN 604

Query: 593 WRLAPIHSDTALDIRFETSPGDKAAAFIKAKGQYPMKKVAVDDIGFAIYQVDL 645
           WR AP+ +DT+  + F+T P  KAAA++ +     ++       GFA Y++ L
Sbjct: 605 WRFAPL-ADTS--VLFDTGP--KAAAYVDSVESIAIEPAGEGPDGFARYRISL 652