Pairwise Alignments

Query, 647 a.a., '2',3'-cyclic-nucleotide 2'-phosphodiesterase (EC 3.1.4.16)' transl_table=11 from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

Subject, 580 a.a., 2',3'-cyclic-nucleotide 2'-phosphodiesterase precursor (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  166 bits (419), Expect = 4e-45
 Identities = 156/619 (25%), Positives = 262/619 (42%), Gaps = 98/619 (15%)

Query: 8   LLATLIAASVNAATVDLRIMETTDLHSNMMDFDYYKDTATEKFGLVRTASLIHAARNEVK 67
           LL  +++ +     V L+I++T+D+H N   +++      +   L R  + +   R + K
Sbjct: 11  LLCLVLSIAAQEKVVKLKIVQTSDVHGNYYPYNFITRKDWQG-SLARIYAFVEKEREQYK 69

Query: 68  -NSVLVDNGDLIQGSPLGDYMAAKGLKDGDVHPVYKALNTLDYAVGNLGNHEFNYGLDYL 126
            N +L+DNGD++QG P   Y     +     H   + +N + Y  GN+GNH+   G    
Sbjct: 70  ENLILLDNGDILQGQPTAYYY--NYIDTVSPHLCAEMMNYMKYDAGNMGNHDVETGRAVF 127

Query: 127 HNALAGAKFPYVNANIIDVKTQKPLFTPYLIKETSVIDKDGNPQTLKIGYIGFVPPQIMI 186
              +    FP + ANIID+ T +P   PY      V+++DG    +KI  +G + P I  
Sbjct: 128 DRWINTCDFPVLGANIIDISTGEPHLPPY-----KVMERDG----VKIVILGMITPAIPA 178

Query: 187 WDKANLSGKVTVNDITETARKYVPEMREK-GADIVVVIAHSGLSA----DPYHSMAENSV 241
           W   NL   +  +D+ ETARK++  +REK   D+++ + H+G  A      Y+  A  SV
Sbjct: 179 WLSENLWKGLRFDDMEETARKWMKIIREKENPDLMIGLFHAGQEAFKMSGKYNENASLSV 238

Query: 242 YYLSEVPGVDAIMFGHAHAVFPGKDFADIKGADIAKGTLNGIPAVMPGMWGDHLGVVDLV 301
                VPG D ++ GH HA    K   ++ G        + +  + P   G  L  +D+ 
Sbjct: 239 --AKNVPGFDIVLMGHDHA-RECKKVMNVAG--------DSVLVIDPASNGIVLSNIDVT 287

Query: 302 LNNDSGKWQVTQAKAEARPIYDAAAKKSLAAEDSKLVGILKADHDATREFVSKPIGKSAD 361
           L    GK +    K       D    +                +D  R FVSK IG   +
Sbjct: 288 LKLKDGKVRSKDIKGVLTETKDYGISEDFMKN-------FAPQYDTVRNFVSKKIGTFTE 340

Query: 362 NMYSYLALVQDDPTVQVVNNAQKAYVEHFIQGDPDLAKLPVLSAAAPFKVGGRKNDPASF 421
           ++ +  +       + +++  Q                L +  A   F        P SF
Sbjct: 341 SISTRPSFFGSSAFIDLIHTLQ----------------LEITGAEISFAA------PLSF 378

Query: 422 -VEVEKGQLTFRNAADLYLYPNTLVVVKASGKEVKEWLECS----AGQFNQIDIH----- 471
             ++ KG +   +  +LY Y N L ++  SGKE+K++LE S      +    D H     
Sbjct: 379 DAKINKGDVFVSDMFNLYKYENMLYMMTLSGKEIKDYLEMSYFMWTNRMKSPDDHLLWFK 438

Query: 472 ---SNKPQSLINWDGFRTYNFDVIDGVNYQIDVSQPARYDGECQMVNPQAERIKNLTF-N 527
                  +   ++  F ++NFD   G+ Y +DV++            PQ E+I  ++  +
Sbjct: 439 EKRREGAEDRASFQNF-SFNFDSASGIIYTVDVTK------------PQGEKITIISMAD 485

Query: 528 GKPVDPNATFLVATNNYRAYGG---KFAGTG------DSHIAFASPDENRAVLAAWIGAE 578
           G P   +  + VA N+YR  GG      G+G         I F++  + R  L  +I   
Sbjct: 486 GSPFLMDKIYKVALNSYRGNGGGELLTKGSGIPQEKLKERIIFSTDKDLRFYLMNYI--- 542

Query: 579 SKRAGEIHPAADNNWRLAP 597
            ++ G + P A N W+  P
Sbjct: 543 -EKKGTMDPKALNQWKFVP 560