Pairwise Alignments

Query, 618 a.a., DNA mismatch repair protein MutL from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

Subject, 641 a.a., DNA mismatch repair protein from Herbaspirillum seropedicae SmR1

 Score =  348 bits (893), Expect = e-100
 Identities = 225/562 (40%), Positives = 315/562 (56%), Gaps = 36/562 (6%)

Query: 2   PIQVLPPQLANQIAAGEVVERPASVVKELVENSLDAGATRVDIDIERGGAKLIRIRDNGC 61
           PIQ LP QL +QIAAGEV+ERP++VVKEL+EN+LDAG+T++ + +E+GG K I I DNG 
Sbjct: 20  PIQALPDQLISQIAAGEVIERPSAVVKELLENALDAGSTQITVRLEQGGVKRIAITDNGR 79

Query: 62  GIKKEELALALARHATSKIASLDDLEAIISLGFRGEALASISSVSRLTLTSRTAEQAEAW 121
           GI  E+L LALARHATSKIASL DLE + +LGFRGEALASI+SV++LT+TSRTA+   AW
Sbjct: 80  GIPPEQLPLALARHATSKIASLTDLENVSTLGFRGEALASIASVAQLTVTSRTADAPHAW 139

Query: 122 QAYAEGRDMDVTVKPAAHPVGTTLEVLDLFYNTPARRKFMRTEKTEFNHIDEIIRRIALA 181
           +          TV PA+   GTT++V DL++NTPARRKF+++E+TE+ H  E++RRIALA
Sbjct: 140 EITG---SQFGTVAPASGAQGTTIDVQDLYFNTPARRKFLKSEQTEYGHCAEVVRRIALA 196

Query: 182 RFDVTLNLSHNGKLVRQYRAVAKDGQKERRLGAICGTPFLEQALAIEWQHGDLTLRGWVA 241
           R DV+ +LSHNGK V  +      G+  +R   I G  F    L ++   G L L G+V 
Sbjct: 197 RPDVSFSLSHNGKTVDHWNV----GEFAKRSAHILGDEFANARLPLDESAGPLRLHGFVG 252

Query: 242 DPNHTTTALTEIQYCYVNGRMMRDRLINHAIRQACEDKLGADQQPAFVLYLEIDPHQVDV 301
            P   + A  + QY YVNGR +RD+L+ HA+R A +D L  D+ PA+ L L +DP  VDV
Sbjct: 253 LPT-ASKARADGQYFYVNGRFVRDKLLTHAVRAAYQDVLHGDRYPAYALSLTLDPALVDV 311

Query: 302 NVHPAKHEVRFHQSRLVHDFIYQGVLSVLQQQTETALPLEEIAPAPRHVQENRIAAGRNH 361
           NVHP+K EVRF  SR VH F++  V   L Q +  +         P    ++  +AG   
Sbjct: 312 NVHPSKIEVRFRDSRAVHQFVFHAVSRALAQTSAVS-----FGNLPGAAPQSDDSAGAPP 366

Query: 362 FAVPA----------EPTAAREPATPR-YSGGASGGNGGRQSA---GGWPHAQPGYQKQQ 407
            A  A          +  +A+    PR +S G + G G RQ+    G    + P   +  
Sbjct: 367 PAANAPLPWIGEQQQQSFSAQFAEAPRPFSFGGNSGFGVRQNTEAYGSMFRSAPTSGEPD 426

Query: 408 GEVYRTLLQTPTASPAPESVTPALDGHSQSFGRVLTIVGGDCALLEHAGTIQLLSLPVAE 467
           G        TP A+PA      AL       G  L  + G   L ++   + ++ +  A 
Sbjct: 427 GSAPAAYGATPAAAPA------ALPEGDFPLGFALAQLHGIYVLAQNQAGLVVVDMHAAH 480

Query: 468 RWLRQAQLTPG--QSPVCAQPLLIPLRLKVSADEKAALQKAQSLLGELGIEFQ-SDAQHV 524
             +   QL      + +  QPLLIP+       E   +++ Q  L  LG +        +
Sbjct: 481 ERILYEQLKTALDGNEMFVQPLLIPVTFYADPVEVGTVEEHQETLSALGFDIAVMSPTTL 540

Query: 525 TIRAVPLPLRQQNLQILIPELI 546
            +RAVP  L+  + Q L  +++
Sbjct: 541 AVRAVPALLKNADAQTLARDVL 562