Pairwise Alignments

Query, 241 a.a., Histidine utilization repressor from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

Subject, 261 a.a., GntR family transcriptional regulator from Herbaspirillum seropedicae SmR1

 Score = 78.6 bits (192), Expect = 1e-19
 Identities = 59/216 (27%), Positives = 106/216 (49%), Gaps = 17/216 (7%)

Query: 11  APFYETVKQDICKKIAGGVWQPHDRIPSEAELVAQYGFSRMTINRALRELTDEGWLVRLQ 70
           +P Y+ +K  I +++  G W+P + IPSE EL +++  S+ T+ +A+ EL  E  +VR Q
Sbjct: 28  SPLYQQIKALIMQRLEAGEWKPGELIPSEVELGSRFKVSQGTVRKAIDELAAENLVVRRQ 87

Query: 71  GVGTFVAEPKGQSALFE-VRSIAEEIAARRHQHRCEVLTLERVRANAIQASALNVNESDV 129
           G GTFVA      A F  +R +A+    +R +++  ++ ++RVRA+A  A  L++   D 
Sbjct: 88  GKGTFVATHHETQAQFRFLRLMADSDEPQRPENK--IIEVKRVRASAEVARQLDMKSGDS 145

Query: 130 IFHSIMVHYENDLPVQIED--------RCVNADIAVDYLTQDYSQTTPHAYLSRIAP-LT 180
           +     V   N +P+ +ED        + + A+  V+Y    Y       + S     + 
Sbjct: 146 VIFIRRVKSFNGVPIILEDIWLPGAIFKGLTAERLVEYRGPLYG-----LFESEFGTRMI 200

Query: 181 EGEHIVEAVRATAQECAWLTIKEHEPCLLIRRTTWS 216
             E  + AV A      +L +    P L + R +++
Sbjct: 201 RAEERIRAVGADPDAAEFLGVTPQTPLLSVERASFT 236