Pairwise Alignments

Query, 317 a.a., Gluconate utilization system Gnt-I transcriptional repressor from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

Subject, 358 a.a., transcriptional regulator from Herbaspirillum seropedicae SmR1

 Score =  163 bits (413), Expect = 5e-45
 Identities = 105/302 (34%), Positives = 157/302 (51%), Gaps = 8/302 (2%)

Query: 2   GVTKMTVSRFLRNPEQVSVALRGKIAAALDELGYIPNRAPDILSNATSRAIGVLLPSLTN 61
           GV+  TVSR L  P  VS     KI  ++ ELG+ PN     L    SR +GV++P+L+N
Sbjct: 13  GVSIATVSRLLNKPGSVSAETAEKIHRSIAELGFRPNFTGRNLRAGNSRTVGVVVPTLSN 72

Query: 62  QVFAEVLRGIEAVTDAHGYQTMLAHYGYKPEMEQERLESMLSWNIDGLILTERTHTPR-T 120
            VFA+ L+GIE    A  Y  M     Y PE E   +E +L   +DG+ILT    +   T
Sbjct: 73  TVFAQCLQGIELAARALDYSVMFTTTEYLPEEETAAVELLLGHRVDGMILTVADASANAT 132

Query: 121 LKMIEVAGIPVVEL-----MDSQSPCLDIAVGFDNFEAARQMTAAIIARGHRHIAYLGAR 175
           L ++E   IP V        D  +     +V  DN  AA    A +I  GHR I  L  R
Sbjct: 133 LDLLERERIPFVLAYNQLGTDQTAAPARASVSVDNRAAACDAVAHLIGLGHRRIQMLSGR 192

Query: 176 LD--ERTIIKQKGYEQAMRDAGLVPYSVMMEQSSSYSSGIELMRQARREYPQLDGIFCTN 233
            +  +R + +  GY  AMR AGL P +V+  +  + ++  +  +       +   +FC+N
Sbjct: 193 FNASDRAMQRYYGYLDAMRAAGLAPMAVIEVERHTLTAAADYQQMMADPRQRPTALFCSN 252

Query: 234 DDLAVGAAFECQRLGLKIPDDMAIAGFHGHDIGQVMEPRLASVLTPRERMGSIGAERLLA 293
           D LA+ A  + + LG+K+P+D+++ GF G  +G +MEP LASV+ P E++G +    L+ 
Sbjct: 253 DLLAMSAMRDLRALGMKVPNDISVMGFDGIPVGALMEPVLASVVQPSEQIGEVALRVLVE 312

Query: 294 RI 295
            I
Sbjct: 313 AI 314