Pairwise Alignments

Query, 316 a.a., Virulence factor VirK from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

Subject, 306 a.a., DUF535 domain-containing protein from Vibrio cholerae E7946 ATCC 55056

 Score =  105 bits (262), Expect = 1e-27
 Identities = 76/283 (26%), Positives = 137/283 (48%), Gaps = 13/283 (4%)

Query: 36  RKASFRRKFLIRSLVMPRATSQLLTNLTQWPELNTLLARQPRLPIRLHRPYMAVNIKRDF 95
           +K  +  +F +  ++MP   +++   L Q P  + +    PR   +  +PY+ V      
Sbjct: 26  KKLRYNARFCLWGILMPDTLARIQDLLNQ-PSFHPVRQHYPRTLEKPLKPYVCVKWPPQE 84

Query: 96  ALDALCFHYQQMRQLLSREQQVSYLSQYGLNLAKFETKTGELFQLDLVSLVSLDKEGEST 155
               L  H+  + +  ++   + Y  Q G +L + E     LF + L      ++EG   
Sbjct: 85  RAQRLIEHFAFLEKRHAQLLPLIYRHQ-GWSLFQHE-----LFSIQLCH--GPEREGSLA 136

Query: 156 IVVRDAQLRILAEITFTLCRFNQQRTLFIGGLQGAANDVPH--EIIQQATKACHGLFPKR 213
           +V+     + L  + F +   N+   + IG LQG   +V +  EII+Q T   HGL PK 
Sbjct: 137 LVLLSQDHQPLFTLAFNISGRNKP-VIHIGALQGPGPNVENRQEIIRQLTHQLHGLRPKA 195

Query: 214 IVMEALCQFAQVFQAEKIIAVSNDAHVYRSWRYM-DKKTQMHADYDAFWESLGGERIKGN 272
           ++ME L   A+ +  EK+  V+N+ HVY++ RY+  K++ +   Y   W+ +GGE I   
Sbjct: 196 LIMEVLLILARYWCVEKVYGVTNEGHVYQALRYIGSKRSSVRFQYSELWQEMGGEAINPY 255

Query: 273 YYTLPLAIARKSEAEIASKKRAEYRRRYALLDSVVEQVPATFK 315
           +++LP    RK+   ++  KR  Y +RYA L  + + + A  +
Sbjct: 256 WHSLPTHPPRKAPLSLSKTKRRLYTKRYAWLTELEQSIQANLQ 298